Gene Gmet_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1587 
Symbol 
ID3740568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1789668 
End bp1790024 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content52% 
IMG OID637778872 
Productribosome-binding factor A 
Protein accessionYP_384544 
Protein GI78222797 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0858] Ribosome-binding factor A 
TIGRFAM ID[TIGR00082] ribosome-binding factor A 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.00540002 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.129345 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAAGC GATCCGATAA AGTTGCTGAA GCTATTCACG AATTGGTGTC CGGGCTCCTT 
GTCAAGGGGC TCAAAGATCC ACGCATCGGG TTCGTGACCA TAACGGGCGT CAAGGTTTCT
GACGATATCC GCCATGCGAC TATCTACTAT ACGGTTATGG GGAGCGACGA AGCGAAGAAG
TCAACCTTGC ACGGGCTGAA CAGTTCCGTA GGATTCATCC GCAAGGAAGT CAGCAAGGAA
CTGCGGCTTC GGTTCGCGCC GGAACTCATC TTCAAGTATG ATGAGTCGAT TGAGTACGGA
AACCGCATTG ACCAGCTTCT CAAGGAAATC GGCAGCGAGG AAGGTGGCAA TGATTGA
 
Protein sequence
MYKRSDKVAE AIHELVSGLL VKGLKDPRIG FVTITGVKVS DDIRHATIYY TVMGSDEAKK 
STLHGLNSSV GFIRKEVSKE LRLRFAPELI FKYDESIEYG NRIDQLLKEI GSEEGGND