Gene Gmet_1585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1585 
Symbol 
ID3740566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1786410 
End bp1787027 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content56% 
IMG OID637778870 
Product50S ribosomal protein L7AE 
Protein accessionYP_384542 
Protein GI78222795 
COG category[K] Transcription 
COG ID[COG2740] Predicted nucleic-acid-binding protein implicated in transcription termination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.0618553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.174445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGGA GCGAGCCTCG GCGAACATGT CTGGGATGTC GGGCTGAGAG GGGGAAGGAC 
GAACTTCTTC GCTATGTCCT TGACCCCGAG GGAACGGTTG TCCCTGATCT CCTGGCAAAG
TTGCCGGGGA GGGGTGCTTA CACCTGCTTT TGCCGCGAGT GTGTCGAGAA GGCCGCTACC
CGGAAGCAAT TTGCCCGCGC CTTTAAGGGC GAGGTGCGGG GTGCAACCAG TATTGACCTC
GTGAATATGG TTGTTTCGAG GCTGGAGGAA CGAATTGCTT CATATCTGGC CCTTGCAAAC
AAGGCAGGAA AGATCGTCTC TGGCAGCGAC ATGGTGATGG AGGCGATGCG CAAGAAGAAC
AAGATCGGTC TTGCAATCAT AGCCGGCGAC GTTTCTGCCG AGATCGGCGA TAAAATCACC
GGTGTGGCTG CCCGTGAGGG GATTCCCTGT TTTCGAATCC TGGACAAGGA CAGGATCGGA
GGGCTTCTGG GCAAGGGATT GCGAAGCGTG GTGGCGATTG AAGCGGGAGG GTTCGTCCCC
CCGTTAGTGA AAGAGTTACA GAGATACGGA AATTTCCTTG ATGGGGGTGC GGTTGATGAG
CAAGACCCAC GTGTATGA
 
Protein sequence
MARSEPRRTC LGCRAERGKD ELLRYVLDPE GTVVPDLLAK LPGRGAYTCF CRECVEKAAT 
RKQFARAFKG EVRGATSIDL VNMVVSRLEE RIASYLALAN KAGKIVSGSD MVMEAMRKKN
KIGLAIIAGD VSAEIGDKIT GVAAREGIPC FRILDKDRIG GLLGKGLRSV VAIEAGGFVP
PLVKELQRYG NFLDGGAVDE QDPRV