| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1584 |
|---|
| Symbol | nusA |
|---|
| ID | 3740565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1785258 |
|---|
| End bp | 1786403 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637778869 |
|---|
| Product | transcription elongation factor NusA |
|---|
| Protein accession | YP_384541 |
|---|
| Protein GI | 78222794 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0195] Transcription elongation factor |
|---|
| TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.0634631 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 0.227689 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAAACGA CCTTCAACCT CAAGCACATT ATTGATCAGA TCGTGAAGGA AAAGGGGATA
GACCGGGATA TCGTGGTCGA GGCCCTTGAG CAGGCGGTGC TGTCCGCCGC GAACAAAAAG
TACCGCAACA CACGCGATCT TGAGGCCCAT TACAATCCCG AGGTCGGTGA AGTTGAGCTT
TTCGAGTTCG TCACCGTGGT TGACGAGGTT ATGGACTCGT ACAAGGAGAT TGATCTTGAG
GAAGCCCGTG AAATCGACCC TGACGTGGAG GTGGGCGACT CCCTCGGTAT GAAGATGGAT
GCCAGCGGTT TCACGCGGAT TGCCGCCCAG ACCGCAAAGC AGGTAATCAT TCAGAAGGTG
CGGGAAGCGG AGCGGGAAAC CATTTTCAAT GAGTTCAAGG ATCGGATCGG CGAGTTGATC
AACGGTGTGG TCCGTCGTTT CGAGAAGGGG GATCTCGTTG TTGATCTTGG TCGCGCCGAG
GCGCTTCTTT CCAACAAGGA GCAGGCACCG CGCGAGGTTT ACCGTCAGGG TGACCGTATC
AAGGCGCTTA TCATGGATAT CCGTATGACT CCCAAGGGTC CCCAGATCAT TCTGTCCCGG
ACCCATCCCG GTGTGCTTGC CAAGCTCTTC GAAGCCGAAG TTCCGGAGAT CGCCGAGGGG
ATCGTTGAAA TCAAGTCCGT CGTCCGCGAA CCGGGAAGCC GGTCAAAAAT TGCGGTTTAC
TCCCACGATT CTGATGTTGA TCCGGTTGGT GCGTGCGTCG GAATGCGCGG ATCGAGGGTT
CAGAACGTTG TGTCCGAGCT TCGTGGCGAG AAAATCGACA TCATCCCGTG GTCTGAAGAC
CCGGCGCGGT TTGCCTGTAA TGCGCTCCAG CCGGCTGCGG TTTCCAAGGT CTACATCGAC
GAAGAAAATA AAGCGCTCGA AATCATTGTC GCCGACGATC AGCTTTCCCT TGCCATTGGC
AAGAAGGGGC AGAATGTTCG GCTTGCCGCA AAACTCACCG GCTGGAGAAT CGACATCAAG
AGTGAAACCC GTGCTGCCGA GGCAGAACTC CTTGAGTTTT CTTCCTACGA CGGTGCTACT
GAGGAAGCGC CTCAGGAACC TGTTGAGGAG TCCGAGGCTC AACCGCTGGA GCAGGGCGAA
GAGTAG
|
|---|
| Protein sequence | METTFNLKHI IDQIVKEKGI DRDIVVEALE QAVLSAANKK YRNTRDLEAH YNPEVGEVEL
FEFVTVVDEV MDSYKEIDLE EAREIDPDVE VGDSLGMKMD ASGFTRIAAQ TAKQVIIQKV
REAERETIFN EFKDRIGELI NGVVRRFEKG DLVVDLGRAE ALLSNKEQAP REVYRQGDRI
KALIMDIRMT PKGPQIILSR THPGVLAKLF EAEVPEIAEG IVEIKSVVRE PGSRSKIAVY
SHDSDVDPVG ACVGMRGSRV QNVVSELRGE KIDIIPWSED PARFACNALQ PAAVSKVYID
EENKALEIIV ADDQLSLAIG KKGQNVRLAA KLTGWRIDIK SETRAAEAEL LEFSSYDGAT
EEAPQEPVEE SEAQPLEQGE E
|
|---|
| |