Gene Gmet_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1553 
Symbol 
ID3738490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1758907 
End bp1760067 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content62% 
IMG OID637778839 
Producthypothetical protein 
Protein accessionYP_384512 
Protein GI78222765 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCC ACTCCATATC ACTCAATAAC CTGCGGCGGC GCAAAGCGAA GATGGCGTTT 
CTCACCATCG GCCTCATGGT CGGCATCGCC ACCATCGTCA CGCTCGTGAC CCTCACCGAA
TCCATGTCCA ACGACATCGG CCGCAAGATG GACGAGTTCG GCGCCAACAT CCTCATCATG
CCCCGAAGCG AGGACTTGGC CATGAGTTAC GGCGGCATCA GCCTCGGCCG GGTAAGCTTC
GACCAGCAGG AGATCCATGA GGGGGACCTG GCGAGAATCC GAGAGATCAA AAACAACAAA
AACATCCTCG CGGTCTCTCC CAAGGTGCTT GGTGCGGCGA CTCTGAAGGA GAAAAACGTT
CTCCTCGTGG GGGTTAACTT CGCGGAAGAG CTCAAGATGA AGCAGTGGTG GCGGATCTTC
GGCGACGAGC CGAAGACTGA GAACGAAATC CTCCTCGGCA GCACCACCGC CGACACGCTC
CACCTCTCCC CCGGCGACTC GGTGACCATC GGGGGCGAGG CCCTGAAGGT GGCGGGAATC
CTGGAACAGA CCGGCTCCCA GGACGACTCG CTGGTCTTCG CGCCCCTGAA AAAGGCCCAG
AAGATCCTCG GCAAGGAGGA CAAGATCACG CTTGTGGAAG TGGCGGCGCT CTGCGCCGGT
TGCCCCATCG GCGACATGGT CGTCCAGATC GCCGAGAAGC TTCCGGAGGC GAAGGTCACC
GCCATTCAGC AGGTGGTGGA GTCGCGGCTC AAGACCCTCG ACCAGTTCAA GCGCTTCTCC
TACGGGGTCG CCGGGGTGGT GATCTTCATC GGCTCACTTA TCGTCTTCGT GACCATGATG
GGGAGCGTCA ACGAGCGGAC CACCGAGATC GGCGTCTTCC GGGCCATCGG TTTCAGAAAG
AGCCACATTA TGCGGATCAT CCTCCTGGAG GCGTCCCTGG TGAGCCTGCT GGCCGGCGCG
TTGGGCTATC TTTCGGGAAT GGGGGCGGCC CGGCTCGCCC TCCCCTTCAT GGCCGAGTCT
GCCAAAGCGG CCCTTGTCTG GGACGGACTG GTGGCGTCGG GCTCCATCGG CCTCGCCGTG
ACGGTGGGGC TCCTAGCGAG CCTCTATCCG GCACTCCACG CCAGCCGTAT GGACCCCACG
GAAGCCCTGC GGGCACTGTA A
 
Protein sequence
MKLHSISLNN LRRRKAKMAF LTIGLMVGIA TIVTLVTLTE SMSNDIGRKM DEFGANILIM 
PRSEDLAMSY GGISLGRVSF DQQEIHEGDL ARIREIKNNK NILAVSPKVL GAATLKEKNV
LLVGVNFAEE LKMKQWWRIF GDEPKTENEI LLGSTTADTL HLSPGDSVTI GGEALKVAGI
LEQTGSQDDS LVFAPLKKAQ KILGKEDKIT LVEVAALCAG CPIGDMVVQI AEKLPEAKVT
AIQQVVESRL KTLDQFKRFS YGVAGVVIFI GSLIVFVTMM GSVNERTTEI GVFRAIGFRK
SHIMRIILLE ASLVSLLAGA LGYLSGMGAA RLALPFMAES AKAALVWDGL VASGSIGLAV
TVGLLASLYP ALHASRMDPT EALRAL