Gene Gmet_1552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1552 
Symbol 
ID3739021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1758186 
End bp1758851 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content63% 
IMG OID637778838 
ProductABC transporter-related protein 
Protein accessionYP_384511 
Protein GI78222764 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTCA TCGAGATCAG TAATCTAACC AAGCACTACT CCTGCGGTGA TGAGACGGTG 
GAGGCGCTGC GGGGGGTCGA CATCGGCATC GAGACCGGCG AGTTCATCAC CATTATGGGA
CAGTCGGGGT CAGGGAAAAG CACCCTTCTT TCCATCCTCG GCGGCATGAA CCACCCGACC
AGCGGCAAGG TGACGGTCAA CGGAACCGAC CTCTACGCCT TGGGAGAGGA GCGGCTGGCC
GATTTTCGGG CCGGGAACTT CGGCTTCGTC TTCCAGTCGT TCCACCTGAT CCCCTATCTC
ACGGCCCAGG AGAACGTCAT GCTCCCCCTG ACCATCGCGT CCCTGAAGGG CGACGAGAAA
CGGCAAGCGG CCCTCCAGGC CCTGGAACGG GTCGGGCTCG GCGGCAAAGC GGACCGGCTG
CCGAACCAGC TCTCCGGTGG CGAACAGGAG CGGGTGGCCA TCGCCCGCGC CATCGTCAAC
CGCCCCCACA TCCTCTTTGC CGACGAGCCC ACCGGCAACC TCGATACCGC CAACAGCGAG
GCGGTCATGG CCCTTTTTCG GGAACTGAAC GACGAGGGTC AGACCGTGGT GATGGTGACC
CACAACCCGG AAAACTGCCA GTACACCGAC CGGACAATTC ACATTCGGGA CGGGAGGGTG
ATCTGA
 
Protein sequence
MALIEISNLT KHYSCGDETV EALRGVDIGI ETGEFITIMG QSGSGKSTLL SILGGMNHPT 
SGKVTVNGTD LYALGEERLA DFRAGNFGFV FQSFHLIPYL TAQENVMLPL TIASLKGDEK
RQAALQALER VGLGGKADRL PNQLSGGEQE RVAIARAIVN RPHILFADEP TGNLDTANSE
AVMALFRELN DEGQTVVMVT HNPENCQYTD RTIHIRDGRV I