Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1552 |
Symbol | |
ID | 3739021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 1758186 |
End bp | 1758851 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637778838 |
Product | ABC transporter-related protein |
Protein accession | YP_384511 |
Protein GI | 78222764 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTCA TCGAGATCAG TAATCTAACC AAGCACTACT CCTGCGGTGA TGAGACGGTG GAGGCGCTGC GGGGGGTCGA CATCGGCATC GAGACCGGCG AGTTCATCAC CATTATGGGA CAGTCGGGGT CAGGGAAAAG CACCCTTCTT TCCATCCTCG GCGGCATGAA CCACCCGACC AGCGGCAAGG TGACGGTCAA CGGAACCGAC CTCTACGCCT TGGGAGAGGA GCGGCTGGCC GATTTTCGGG CCGGGAACTT CGGCTTCGTC TTCCAGTCGT TCCACCTGAT CCCCTATCTC ACGGCCCAGG AGAACGTCAT GCTCCCCCTG ACCATCGCGT CCCTGAAGGG CGACGAGAAA CGGCAAGCGG CCCTCCAGGC CCTGGAACGG GTCGGGCTCG GCGGCAAAGC GGACCGGCTG CCGAACCAGC TCTCCGGTGG CGAACAGGAG CGGGTGGCCA TCGCCCGCGC CATCGTCAAC CGCCCCCACA TCCTCTTTGC CGACGAGCCC ACCGGCAACC TCGATACCGC CAACAGCGAG GCGGTCATGG CCCTTTTTCG GGAACTGAAC GACGAGGGTC AGACCGTGGT GATGGTGACC CACAACCCGG AAAACTGCCA GTACACCGAC CGGACAATTC ACATTCGGGA CGGGAGGGTG ATCTGA
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Protein sequence | MALIEISNLT KHYSCGDETV EALRGVDIGI ETGEFITIMG QSGSGKSTLL SILGGMNHPT SGKVTVNGTD LYALGEERLA DFRAGNFGFV FQSFHLIPYL TAQENVMLPL TIASLKGDEK RQAALQALER VGLGGKADRL PNQLSGGEQE RVAIARAIVN RPHILFADEP TGNLDTANSE AVMALFRELN DEGQTVVMVT HNPENCQYTD RTIHIRDGRV I
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