| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1548 |
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| Symbol | |
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| ID | 3739017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 1754572 |
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| End bp | 1755972 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637778834 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_384507 |
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| Protein GI | 78222760 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0420429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.648627 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGA GTGCAAAGGT AGCAGTTCCG GTGGCAGTGG TTCTCCTGGC CGCGGCAGGC
GGCGGGGGGT ACTACCTGTG GCACAACCAG AAGGCGGAGA CCGCAACAGG AGCAAAACAG
GGGGAAAAGG CCGCCCAGGG GAAGGTGCTC TACACCTGCG CCATGCATCC CTTCATCATC
AAGGACAAGC CCGGTACCTG CCCCATTTGC GGGATGGAGC TCATCAAAAA AGTGGAAGGC
GCCCAGGCAG ATGCCAAGGA AATGGCCATG CTCGAGCATG TTTCCCTCTC GCCTTCCCAG
CAGGTGATGG CCAATGTTGC CACCGTTGAG GCAAAGACGA TGCCCCTCAC CAAGGAGGTG
AATGCTGTCG GCATCGTGCA GTACGACCAG TCCCGGCAGG CGAAGGTCAC CGCGTGGGTG
GCGGGCCGCA TTGACAGGCT CTACGTCAAC ACCGTTGGCG CCTATGTGTC CAAGGGAAAA
CCGGTGGCCG AGGTCTATTC GCCCGATCTC GTCTCCGCTC AGCAGGAATA CCTCCTGGCA
CTGAAGAGCC GCGACCGGTT CAAGGACTCC CCCATTGCCT CCATCTCCCA GGGGGGAGAG
GGGCTCGTGG CCTCGGCCCG GCAGCGGCTC CTCCTCATGG GGGTAAAGGA GCACCAGATC
GCAGGGCTTC AGAAGGCCGG TCGTCCCAAT ATCCGTCTTC CTATTTACAC CCCCCTCTCG
GGGGTGGTGA TCGAGAAGAT CGCCATTGAG GGGCAGTACG TGAACACGGG GGATCCCCTC
TTCAACATCG CCGACCTCTC CACCGTCTGG GTGGACGTGG AGGTCTACGA AAACGAATTC
TCCTTCATAA AGCTCGGCCA GCGGGTCGAC ATCGTTTCCC AGTCTTATCC CGGTAAGACC
TTCTCGGGTC GGGTGTCGTT CGTCTACCCC TTCCTCGACC CCAAGACCCG GACGGTCAAG
GTGCGGGTCC AACTTCCCAA TCCAGGCCTG AAGCTCAAGC CGGACATGTT CGTGAACGCG
TCGGTCAAGG TGCCGCTCGG CACCGCCGTG ACCGTGCCGG TGGCCGCAGT GATGGACACC
GGTAAGCGGC AGGTAGCATG GGTTGAGATG AAGCCGGGAA TGTTCGAGCC CCGGGACGTG
AAGGTGGGCG CCCGGGTGGG GGACATGCTC CAGGTGCTCT CCGGGGTGAA GGCAGGCGAA
AAGGTTGCGG CATCGGGCGG GTACCTGATC GACTCCGAAG CGCAGCTGAA AGGGACTGGC
GGCGGCCATG CCGGCATGCC GGGGATGAAG ATGGAGGAGA AAGGCGCTCC GGCTCCCCCG
GCCGGTCATG AAGGGCACAC GCCGTCCGCT CCTCCCCAGA AGAAGGGGGG CGGCATGGAT
ATGGGTGATA TGAAAATGTA A
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| Protein sequence | MKLSAKVAVP VAVVLLAAAG GGGYYLWHNQ KAETATGAKQ GEKAAQGKVL YTCAMHPFII
KDKPGTCPIC GMELIKKVEG AQADAKEMAM LEHVSLSPSQ QVMANVATVE AKTMPLTKEV
NAVGIVQYDQ SRQAKVTAWV AGRIDRLYVN TVGAYVSKGK PVAEVYSPDL VSAQQEYLLA
LKSRDRFKDS PIASISQGGE GLVASARQRL LLMGVKEHQI AGLQKAGRPN IRLPIYTPLS
GVVIEKIAIE GQYVNTGDPL FNIADLSTVW VDVEVYENEF SFIKLGQRVD IVSQSYPGKT
FSGRVSFVYP FLDPKTRTVK VRVQLPNPGL KLKPDMFVNA SVKVPLGTAV TVPVAAVMDT
GKRQVAWVEM KPGMFEPRDV KVGARVGDML QVLSGVKAGE KVAASGGYLI DSEAQLKGTG
GGHAGMPGMK MEEKGAPAPP AGHEGHTPSA PPQKKGGGMD MGDMKM
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