| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1543 |
|---|
| Symbol | |
|---|
| ID | 3739012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 1748725 |
|---|
| End bp | 1749372 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637778829 |
|---|
| Product | YHS |
|---|
| Protein accession | YP_384502 |
|---|
| Protein GI | 78222755 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3350] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.258352 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAGA CCGGACAACT GTCGGAGAAA ATTCGCAAGC GCCTCGACAG GCACCTGAAC
GAACTTGCGG AGAGGCAGAA GCAGATCGAC AGCACGATGA AGGAGATGCT GGGTCAACGT
GAGCGATTTG CCGCTGCCGC CCATCGCCTC CTGGAATCCG TTGTCCATCC CAGGATGGTG
GAGTTGTCGC ACCAATTCGA AAACGCCTTC GTTTCCGATC GGCATTCCGG CACCGACTTT
TACTGCTCCT GCGAGTTTGC CCACACGCCG CGCTTTCCCG CCACTGTCAC TCTCGACATC
GGTCTGTTTC CAGAGGAGAC GGGCGAAAAG GTGGCGATCC GCTCCACTCT GGACATACTT
CCCACGCTAA TGGAGTACAA ACGAAACGAC GAGACAACCC TCCCGCTCGA AGGCTCTGAT
GAAGCGGTTG GCCGGTGGGT GGAAGAAAAA ATCCTTGAAT TTGTCGACAC CTACCTTCGG
CTGGAAACCC ATCCCCTCTA TCAGAAAGAC TATACCGTCG TGGACCTGGT CTGCGGCATG
CCGATCTCGG CGACCACTGC CCCATGCAGG ATCGAGCTAC ACGGCCGCGC GCTCTATTTT
TGCTCGGAAC ACTGCAAGGA TGCCTACCTG AAGGAGAAAG CCCCCTAG
|
|---|
| Protein sequence | MEETGQLSEK IRKRLDRHLN ELAERQKQID STMKEMLGQR ERFAAAAHRL LESVVHPRMV
ELSHQFENAF VSDRHSGTDF YCSCEFAHTP RFPATVTLDI GLFPEETGEK VAIRSTLDIL
PTLMEYKRND ETTLPLEGSD EAVGRWVEEK ILEFVDTYLR LETHPLYQKD YTVVDLVCGM
PISATTAPCR IELHGRALYF CSEHCKDAYL KEKAP
|
|---|
| |