Gene Gmet_1535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1535 
Symbol 
ID3739004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1737984 
End bp1739345 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content55% 
IMG OID637778821 
Productaromatic hydrocarbon degradation membrane protein 
Protein accessionYP_384494 
Protein GI78222747 
COG category[I] Lipid transport and metabolism 
COG ID[COG2067] Long-chain fatty acid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.745918 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATA AAATTGTAAC ACCGTACACC TTGGCAATGG TCGCAATCAT AGTGTCGACT 
ACGTTGCGAG TGTCTTATGC AACAGATGTG TTCCGGCTCG AGGGGTTTGG CCCCGTATCG
CGCGGCATGG GGGGGGCCGC AACGGCATTT GATGTCGGCG CAGCGGGAAT GATGACTAAT
CCGGCAACAC TGTCGCTGAT GGGCGCCGGT TCTGAAATCC ACGTGGGCCT GGACGTTGTT
GTGACCGATA TTTCCGCTAA AAATAAGGCA ACAGGGGAAA ATGCCTCGTC TGACTCCCAC
TCCAATAACC GTGGCCCCTA TGCCGCACCC GAAGCGGGAT TTGTCTATCG GGCCGCCCCC
CTGACCCTTG GATTTGGTGC GTTCGCCCAA GGTGGACTGG GAACGGAGTA TGGAAGGAAT
ACCTTTCTTT CCCGTGCCTC CGGCAACCTG GACACAGGGC TTGATAATTC CAGCCGTCTG
CTGGTTTTGA ATGTCCCCTT CGCAATAACC TACGATATCA ACGAAAAGTT GACCATAGGA
GCCGCCATCG ATGCAATGTG GGAAGGTCTG AACCTGGAAC TCCTGCTGCC GGCAGAAGAT
GTTGGCGCTC TGATCCAGGG GGGGCGCGTT ACCGGCAGCT TGCTCCCTGT ACTGGGAGGA
CTCCCCGACT TACGCGGCGC TCATTTCAGC ATGACGAAAA ATCAACCCAT CGCAAGCGGC
ATAGATGCGT GGGGTTTCGG CGCCCGGATC GGGGGGGTCT ACAAACTGTC CAAGGACACT
ATTATTGGCG CCGCGTACAC CATGGAAAGC CGGATGGCGG ACATGGAAGG CAATGCCACC
ATGACTGCAG TCGACGGGAG TGCGGGACAG ATTCCGCTCA AGGGGAAGAT AAAGTTGGGT
GGCCTGCAGA TGCCGGCCCA GCTGGATATT GGCGTCAGTC ACCAGATCAA CGAACATTGG
TTGGTGGTTG CGGATATCTC GCGGGTTTTC TGGAAGAATG CCGTGAAAGA CCTGAAGGTC
CATTTCGTGA CCGATAACGG TGAGGATATC CATATCTCCT TACCTCAGAA CTACAAGGAT
CAGATGATTT ATTCCCTTGG TGTCGCATAC CGAACAGGGC ACTGGACGTT GCGCTGCGGT
GGGCGGATTG CCAGCCAGGC CATGCGCTCC GACACGGTGA TTGCGGTCAT ACCCGCCATT
CCCACCAAGC ATGCATCGGC AGGATTCTCG TATGATTTTT CGGCGGCGAA CACGGTGGAT
TTTGCCTATT CCCATGCGTT TGAGGAATCG TTCGACAATG CGAACACACG GCTTGTGCAT
TCGCAGAACA ACTTCAGTAT TGCCTATACC CACAGGTTTT AA
 
Protein sequence
MKYKIVTPYT LAMVAIIVST TLRVSYATDV FRLEGFGPVS RGMGGAATAF DVGAAGMMTN 
PATLSLMGAG SEIHVGLDVV VTDISAKNKA TGENASSDSH SNNRGPYAAP EAGFVYRAAP
LTLGFGAFAQ GGLGTEYGRN TFLSRASGNL DTGLDNSSRL LVLNVPFAIT YDINEKLTIG
AAIDAMWEGL NLELLLPAED VGALIQGGRV TGSLLPVLGG LPDLRGAHFS MTKNQPIASG
IDAWGFGARI GGVYKLSKDT IIGAAYTMES RMADMEGNAT MTAVDGSAGQ IPLKGKIKLG
GLQMPAQLDI GVSHQINEHW LVVADISRVF WKNAVKDLKV HFVTDNGEDI HISLPQNYKD
QMIYSLGVAY RTGHWTLRCG GRIASQAMRS DTVIAVIPAI PTKHASAGFS YDFSAANTVD
FAYSHAFEES FDNANTRLVH SQNNFSIAYT HRF