Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1535 |
Symbol | |
ID | 3739004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 1737984 |
End bp | 1739345 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637778821 |
Product | aromatic hydrocarbon degradation membrane protein |
Protein accession | YP_384494 |
Protein GI | 78222747 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2067] Long-chain fatty acid transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.745918 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATATA AAATTGTAAC ACCGTACACC TTGGCAATGG TCGCAATCAT AGTGTCGACT ACGTTGCGAG TGTCTTATGC AACAGATGTG TTCCGGCTCG AGGGGTTTGG CCCCGTATCG CGCGGCATGG GGGGGGCCGC AACGGCATTT GATGTCGGCG CAGCGGGAAT GATGACTAAT CCGGCAACAC TGTCGCTGAT GGGCGCCGGT TCTGAAATCC ACGTGGGCCT GGACGTTGTT GTGACCGATA TTTCCGCTAA AAATAAGGCA ACAGGGGAAA ATGCCTCGTC TGACTCCCAC TCCAATAACC GTGGCCCCTA TGCCGCACCC GAAGCGGGAT TTGTCTATCG GGCCGCCCCC CTGACCCTTG GATTTGGTGC GTTCGCCCAA GGTGGACTGG GAACGGAGTA TGGAAGGAAT ACCTTTCTTT CCCGTGCCTC CGGCAACCTG GACACAGGGC TTGATAATTC CAGCCGTCTG CTGGTTTTGA ATGTCCCCTT CGCAATAACC TACGATATCA ACGAAAAGTT GACCATAGGA GCCGCCATCG ATGCAATGTG GGAAGGTCTG AACCTGGAAC TCCTGCTGCC GGCAGAAGAT GTTGGCGCTC TGATCCAGGG GGGGCGCGTT ACCGGCAGCT TGCTCCCTGT ACTGGGAGGA CTCCCCGACT TACGCGGCGC TCATTTCAGC ATGACGAAAA ATCAACCCAT CGCAAGCGGC ATAGATGCGT GGGGTTTCGG CGCCCGGATC GGGGGGGTCT ACAAACTGTC CAAGGACACT ATTATTGGCG CCGCGTACAC CATGGAAAGC CGGATGGCGG ACATGGAAGG CAATGCCACC ATGACTGCAG TCGACGGGAG TGCGGGACAG ATTCCGCTCA AGGGGAAGAT AAAGTTGGGT GGCCTGCAGA TGCCGGCCCA GCTGGATATT GGCGTCAGTC ACCAGATCAA CGAACATTGG TTGGTGGTTG CGGATATCTC GCGGGTTTTC TGGAAGAATG CCGTGAAAGA CCTGAAGGTC CATTTCGTGA CCGATAACGG TGAGGATATC CATATCTCCT TACCTCAGAA CTACAAGGAT CAGATGATTT ATTCCCTTGG TGTCGCATAC CGAACAGGGC ACTGGACGTT GCGCTGCGGT GGGCGGATTG CCAGCCAGGC CATGCGCTCC GACACGGTGA TTGCGGTCAT ACCCGCCATT CCCACCAAGC ATGCATCGGC AGGATTCTCG TATGATTTTT CGGCGGCGAA CACGGTGGAT TTTGCCTATT CCCATGCGTT TGAGGAATCG TTCGACAATG CGAACACACG GCTTGTGCAT TCGCAGAACA ACTTCAGTAT TGCCTATACC CACAGGTTTT AA
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Protein sequence | MKYKIVTPYT LAMVAIIVST TLRVSYATDV FRLEGFGPVS RGMGGAATAF DVGAAGMMTN PATLSLMGAG SEIHVGLDVV VTDISAKNKA TGENASSDSH SNNRGPYAAP EAGFVYRAAP LTLGFGAFAQ GGLGTEYGRN TFLSRASGNL DTGLDNSSRL LVLNVPFAIT YDINEKLTIG AAIDAMWEGL NLELLLPAED VGALIQGGRV TGSLLPVLGG LPDLRGAHFS MTKNQPIASG IDAWGFGARI GGVYKLSKDT IIGAAYTMES RMADMEGNAT MTAVDGSAGQ IPLKGKIKLG GLQMPAQLDI GVSHQINEHW LVVADISRVF WKNAVKDLKV HFVTDNGEDI HISLPQNYKD QMIYSLGVAY RTGHWTLRCG GRIASQAMRS DTVIAVIPAI PTKHASAGFS YDFSAANTVD FAYSHAFEES FDNANTRLVH SQNNFSIAYT HRF
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