Gene Gmet_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1488 
Symbol 
ID3740205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1682727 
End bp1683776 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content56% 
IMG OID637778774 
ProductGDP-mannose 4,6-dehydratase 
Protein accessionYP_384447 
Protein GI78222700 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1089] GDP-D-mannose dehydratase 
TIGRFAM ID[TIGR01472] GDP-mannose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAAAG CACTGATTAC CGGCATCACC GGTCAGGATG GCTCCTACCT GGCGGAGTTG 
CTGCTGCAAA AGGGTTACGA AGTCCACGGC ATGATCCGCC GTTCGTCATC CTTTAACACA
GGTCGGATTA ACCACATCTA CCGCGATCCA CACGAAAAGG ACGTCCGGTT GTTTTTGCAC
TATGGTGATC TCAACGACGC CAGTTCCATC AACACCCTGC TGCGCATCGT CCAACCGGAC
GAGATCTACA ATCTTGGTGC CCAGAGCCAT GTCCGGGTCT CATTCGATGT GCCGGAATAC
ACCGGAGAGG TGGATGCCCT GGGAGCGGTA CGGATACTCG AGGGAATCCG GGAAACCGGA
CTTAATACCA GATTTTATCA GGCGTCATCT TCTGAACTCT ATGGAAAGGT CGTTGAGACA
CCACAGCGTG AATCGACTCC ATTTTACCCC CGGTCCCCCT ACGGTTGTGC CAAGGCTTAT
GCCTACTACA TCACCCAGAA CTATCGCGAA AGCTACGACA TTTACGCCTG CAACGGCATT
CTCTTCAATC ATGAGTCACC TCGGCGTGGC GAAACCTTTG TTACCCGAAA GATCACCCGG
GCGGCGGCCC GGATCAAGTT GGGGCTCCAG AACTGTCTCT ATCTGGGGAA CCTGGATGCA
AAACGGGACT GGGGATTTGC CGGAGATTAC GTTGAAGCGA TGTGGCTGAT GCTGCAACAG
GAGCAGGCGG ACGACTATGT TATCGCCACC GGCGAGACCT ATATGGTCCG AACCTTCGCC
GAAAAGGTTT TCGCCCGCCT TGGGATGCCG CTTGAATGGG GGGGGAGCGG CGATCGGGAA
GAAGGGGTTG ACACCGCTAC CGGCAAGCCT CTGATTCGCG TTGACTCCAA ATATTTCCGT
CCCGCAGAGG TTGACTTGCT ACTGGGAGAC CCATCAAAGG CAAAGCGGGT GCTCGGCTGG
CAACAGCAGA CCAGCTTTGA CCAGTTGGTC GCCATGATGA CCGATGCCGA TCTGGCGCTG
GCAGAGCGGG AAATGCGCGC CAATGGATAA
 
Protein sequence
MKKALITGIT GQDGSYLAEL LLQKGYEVHG MIRRSSSFNT GRINHIYRDP HEKDVRLFLH 
YGDLNDASSI NTLLRIVQPD EIYNLGAQSH VRVSFDVPEY TGEVDALGAV RILEGIRETG
LNTRFYQASS SELYGKVVET PQRESTPFYP RSPYGCAKAY AYYITQNYRE SYDIYACNGI
LFNHESPRRG ETFVTRKITR AAARIKLGLQ NCLYLGNLDA KRDWGFAGDY VEAMWLMLQQ
EQADDYVIAT GETYMVRTFA EKVFARLGMP LEWGGSGDRE EGVDTATGKP LIRVDSKYFR
PAEVDLLLGD PSKAKRVLGW QQQTSFDQLV AMMTDADLAL AEREMRANG