Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1461 |
Symbol | |
ID | 3740482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1640671 |
End bp | 1641399 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637778747 |
Product | TonB-dependent receptor, putative |
Protein accession | YP_384420 |
Protein GI | 78222673 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACGC ACAAGAAGAA AAAGCCCCAG CTGAAGAATT TTTTCGTCCC GGCAGCGGTG GTGCTTGTCA TCATCGGCGG CATCGGCTTC GTGGCCAAGG TGATGCTGAC CGATACCGGC GCTCCCCGGA AGAACAAGAT CACCACGGTA TCACTCGTGA AGCCGCCCGA ACAGCCCAAG GAGAAGCCCC CCGAGCCGGA GCCCCCCAAG GAGATGCCAA AACCGCAGCA GATTGAGACC CCCACCATGG CCCAGCCCGA TTCTCCCCAG CAGGCGAGCC AGGCACCGGA CGACGGTCCT GCGGCCGGAA GCGATCTGGG GGTCGACGGC GAGGGGGGGG CTGGCTCCGA CGGTTTCGGC CTCGTGGGGA AGAAAGGCGG CCGCGCCATA ACCCTCGGCG GCGGGGGAGG CGGCGGAGGC GGCATGAACC GGTTGTCGCT CCTTGCCAGG TACGGCTGGT ACACGAAAAA GGTGCAGGAC GAGATCCGGG GCAAGGTGAA GTCGCTTCTG AACGACAACG GCGGTTTTCC CAAGGGGAAA CTCCAGGCCG TGGTCAAGCT GACGCTCGAT GCGAGGGGGG TGGTGGTGGA TCATCGCATT GTCGGATCAT CGGGCGATAC CCGCATGGAT GAGGCGGTGC GCAAGTCCCT CGGCTTGATC CGGATCAGCG AGGCCCCCCC TGCGGATATG CCCCGGACCA TGACCATCAA GATATCGTCC CTGGGATAG
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Protein sequence | MATHKKKKPQ LKNFFVPAAV VLVIIGGIGF VAKVMLTDTG APRKNKITTV SLVKPPEQPK EKPPEPEPPK EMPKPQQIET PTMAQPDSPQ QASQAPDDGP AAGSDLGVDG EGGAGSDGFG LVGKKGGRAI TLGGGGGGGG GMNRLSLLAR YGWYTKKVQD EIRGKVKSLL NDNGGFPKGK LQAVVKLTLD ARGVVVDHRI VGSSGDTRMD EAVRKSLGLI RISEAPPADM PRTMTIKISS LG
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