| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1446 |
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| Symbol | |
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| ID | 3739089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1615683 |
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| End bp | 1617242 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637778732 |
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| Product | lipopolysaccharide biosynthesis |
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| Protein accession | YP_384405 |
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| Protein GI | 78222658 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR03007] polysaccharide chain length determinant protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCAG AAATCAAATC GTTCGGCGAT ATCGTACGGA TCGTAAAGCG GCGCAGGCTG
AGCCTCATCG TTCCGGCTGC GGTCATATTT GCGATGACGC TCGTGGCCGC AGTGGTGTTG
CCGCGCATCT ACCGTTCCAC CTCCACGATC CTCATCGAGG AGCAGGAGAT TCCCCGCGAT
TTCGTCATGA CCACCGTGAC GAGCTACGCC GAGGAGCGTC TCCAGACCAT CAACCAGCGG
ATCATGAGCT CCACGAAACT CCTGGAGATC ATCAACCGCT TCAATCTCTA CAGCGACCTG
CGCAAGAGCA AGACCACCGA AGAGATCATC TCCCAGATGC GCGGGGACAT CAAATTCCAG
ACCATCAGCG CCGATGTTGT GGATCGCCGC ACCGGCAGGC CCACCGCCGC CACCATCGCC
TTCTCCCTCT CTTACGATGG GAAGAGCCCG GCAACGGTCC AGCAGGTGTC GAACGTCCTG
GCATCCCTCT ACCTGGAGGA GAACCTCAGG GTTCGCGAGC AGCAGACCCT GGGAGCCACC
CGGTTCATGG AAGAGGAAAT GAAGGATGTT CAGGCAAAGC TCGTGGAGAT CGAGAGAAAG
ATCGCCGATT ACAAGCAGCG CAACGTGAGC GCGCTGCCCG AGCTTGCCCA GTTGAACATG
CAGACACTTG ACCGGAGCGA CCGGGACGTG GACCAGTTCC ATGACCAGCT GCGAATGCTG
CGGGAGAAGG AAGGGTATCT GGAGGCCCAG CTTTCCAGTA TCCCCACGGA CGACGCCAAC
ACCGACAAGG GGCGGCTGCG GGAATTGCGG GTGAAGCTTG TGGACCTCAA GACCCGCCTC
TCCGATGCCC ATCCCGACGT GATCAAGGCC CGCTCCGAGA TTGCCGCCCT TGAAAGACAG
CTCAAGGGGT CGGGACGCAA TATGGAAAGC AAGCCCGACA ATCCTGCCTA CGTGACCCTC
TCGGCCCAGC TGGCCAGCAC CCGGTCCGAG ATCGAATCGG TCAAGCGCCA GGTGCAGCTG
GCCCAGGGCA AGCGCGACAG TTACCGCCGC CGCCTGGAGG CTTTCCCCCA GGTGGAGGAG
GGGTACAAGG TGCTGCTCGT GGAGCGGAAC AACCTTCAGC TCAAATATGA CGATCTCTCC
AAGAAGTTCA TGGAAGCCAA AGTGGCCCAT GGCCTCGAAA AGGAGCAGAT GGGGGAACGC
TTCACCCTCA TCGACGCGGC CCGGCTCCCC GAGAAACCGG TGAGCCCCAA TGTGCCGGCC
ATCCTCGTTA TCGGCCTGAT TCTCGGGCTG GGTGCCGGCA TCGGCACCGC CGCCTTCAGG
GAATACGGCG ATCAGTCCGC CCACGGCATC GAAACCCTGG CACGGGCCAC GGCCCTGCCG
GTGCTCGCCG CGATCCCCGA GATCGTCACC CTGGAGGAAA CCGACGTCCG CAAGCGGCGT
TATCGGATGG CGGCAGCCGG GGTGGCCATG GTCATCATTG TGGCGATTCC GCTTATTCAC
TTCTTCGTCA TGGATCTGGA TATCATCGTG GCCAAGATGA TGCGGCGGCT CTCCGTCTAG
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| Protein sequence | MEAEIKSFGD IVRIVKRRRL SLIVPAAVIF AMTLVAAVVL PRIYRSTSTI LIEEQEIPRD
FVMTTVTSYA EERLQTINQR IMSSTKLLEI INRFNLYSDL RKSKTTEEII SQMRGDIKFQ
TISADVVDRR TGRPTAATIA FSLSYDGKSP ATVQQVSNVL ASLYLEENLR VREQQTLGAT
RFMEEEMKDV QAKLVEIERK IADYKQRNVS ALPELAQLNM QTLDRSDRDV DQFHDQLRML
REKEGYLEAQ LSSIPTDDAN TDKGRLRELR VKLVDLKTRL SDAHPDVIKA RSEIAALERQ
LKGSGRNMES KPDNPAYVTL SAQLASTRSE IESVKRQVQL AQGKRDSYRR RLEAFPQVEE
GYKVLLVERN NLQLKYDDLS KKFMEAKVAH GLEKEQMGER FTLIDAARLP EKPVSPNVPA
ILVIGLILGL GAGIGTAAFR EYGDQSAHGI ETLARATALP VLAAIPEIVT LEETDVRKRR
YRMAAAGVAM VIIVAIPLIH FFVMDLDIIV AKMMRRLSV
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