| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1431 |
|---|
| Symbol | |
|---|
| ID | 3738561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1601768 |
|---|
| End bp | 1602709 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637778716 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_384390 |
|---|
| Protein GI | 78222643 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.000855956 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTTC TGGTAACCGG CGGGGCAGGG TTCATTGGCT CCCATCTGTG CGAGCGGTTG
GTCAGTGACG GCCACGAGGT TCTCTGTGTC GATAACTTCT TTACGGGGAG CAAACAAAAC
ATCCTGCCGC TCTTGGGAAA CCCCCGTTTC GAGTTGATCC GCCACGATAT AACCGAGCCG
ATTCTTCTGG AGGTGGACCA GATATATCAT CTGGCCTGTC CCGCTTCGCC GGTCCATTAT
CAGTACAACC CGGTGAAGAC CATCAAGACA AGCGTCATGG GGACCATCAA CATGCTTGGC
CTCGCCAAGC GGGTCCGGGC GCGAATCCTT CTGGCCTCCA CCTCTGAAGT CTACGGCGAT
CCCCAGGTGC ATCCGCAGCC CGAGACCTAC TGGGGGAACG TTAACCCCAT CGGAATCCGC
AGCTGCTACG ACGAAGGGAA GCGGGTTGCG GAAACCCTCA TGATGGATTA CCATCGCCAG
AATGGTGTCG ACATCCGCAT CGTCCGGATT TTCAACACCT TTGGCCCCCG CATGGCCGAG
CATGACGGCA GGGTGGTGTC GAACTTCATT GTTCAGGCTC TCAAAGGGGA AGACATAACG
GTCTATGGCG ACGGCAGCCA GACCCGCTCC TTCTGCTATG TGAGCGACTT GGTGGAAGGG
CTTGTCCGGA CGATGTCATG TGAAGGCTTC ACCGGTCCGG TCAACCTGGG CAACCCCGGT
GAAACTACTA TCCTGGAATT TGCCCGGCGC ATAATCGCAC TGACCGGTTC CCAGTCGCAG
ATTGTTTTCA GGCCTCTCCC GTCGGATGAC CCCAAGCAGC GCCAACCCGA TATAACCCTC
GCCCGGACGA CGCTTGGATG GGAGCCTATC GTGCCCCTGG AAACGGGTCT CACAAAGACA
GTTGATTATT TCTCCGGCCT CGGTGCCGGT TCGGGTTCAT GA
|
|---|
| Protein sequence | MRVLVTGGAG FIGSHLCERL VSDGHEVLCV DNFFTGSKQN ILPLLGNPRF ELIRHDITEP
ILLEVDQIYH LACPASPVHY QYNPVKTIKT SVMGTINMLG LAKRVRARIL LASTSEVYGD
PQVHPQPETY WGNVNPIGIR SCYDEGKRVA ETLMMDYHRQ NGVDIRIVRI FNTFGPRMAE
HDGRVVSNFI VQALKGEDIT VYGDGSQTRS FCYVSDLVEG LVRTMSCEGF TGPVNLGNPG
ETTILEFARR IIALTGSQSQ IVFRPLPSDD PKQRQPDITL ARTTLGWEPI VPLETGLTKT
VDYFSGLGAG SGS
|
|---|
| |