| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1421 |
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| Symbol | |
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| ID | 3738550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1588651 |
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| End bp | 1589631 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637778705 |
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| Product | sigma 28 (flagella/sporulation) |
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| Protein accession | YP_384380 |
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| Protein GI | 78222633 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.000137657 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.258497 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATGATT TTCTCGAAAA GGAAGCCGTT GAACCTGAAG AACATGCCGA GCGGCAACCT
GACGATTTTC TGGAGCCGGA ACCGACTTCT TTTGAATATG AGGAAGCGGA GGAAGAGGAA
GAACAGGAGG AAGAGATAAA AGTCGTCGAG GTGGAACACT TTGACGACGC GATCAAGCTT
TACCTCCGGG AGATACAGAG AACAACCCTT CTTACGGCCG ATGAAGAAAA GGTTCTTGCC
AGCCGGATTG CAAAGGGCGA CAAAGCCGCC CGCGATAAGA TGATAGAGTC CAATCTGCGT
CTCGTGGTCA AGATAGCCAA GCGGTATATC AATCGCGGGC TCCCGTTCCT TGATCTCATC
GAAGAGGGGA ACATGGGGCT CATCAAGGCA GTCGAGCGCT TCAAACTGTC CAAAGAGTGT
CGTTTTTCCA CCTATGCCAC CTGGTGGATA CGCCAGTCCA TTGAGCGGGC ACTGGTGAAT
CAGTCGCGTA CCATAAGGCT TCCGGTACAC GTCTCCGATG ACATCAACAA GATGCTCAAA
ATCACCCGCG AGTTAGTCAA TCGGTTCAAC CGTGAACCGA CGGTCAAAGA AGTGGCAACC
GAGATGAATG TCAACTCGGC ATACATTCGG CGACTCATGG TTCTACTCAA AAAAACCTAT
TCTATTGAAC GGCCCATGGG AGAGAACAGC GATTATTTCC TTATCGACAC CATTGAGGAT
ACCTCGTCGG TTTCACCGGC GGTGCTGCTT GAAGATCTGA ACAAGTATGA GATTGTCTCC
AAATGGTTTG CGTCGCTCTC AGAGAACGAG CAGAAGATTC TTACCCTGCG TTTCGGGCTT
GAAGACAAGG AACCTCAGAC CCTTGACACG ATCGGGCGGA GCTTTGGGGT TACCCGTGAG
CGAATTCGCC AGATAGAGGC GAAATCTCTC GAAAAGCTCA GAAAATACAT CGATAACAGT
GATGGAAGTG CAATCGAGTG A
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| Protein sequence | MDDFLEKEAV EPEEHAERQP DDFLEPEPTS FEYEEAEEEE EQEEEIKVVE VEHFDDAIKL
YLREIQRTTL LTADEEKVLA SRIAKGDKAA RDKMIESNLR LVVKIAKRYI NRGLPFLDLI
EEGNMGLIKA VERFKLSKEC RFSTYATWWI RQSIERALVN QSRTIRLPVH VSDDINKMLK
ITRELVNRFN REPTVKEVAT EMNVNSAYIR RLMVLLKKTY SIERPMGENS DYFLIDTIED
TSSVSPAVLL EDLNKYEIVS KWFASLSENE QKILTLRFGL EDKEPQTLDT IGRSFGVTRE
RIRQIEAKSL EKLRKYIDNS DGSAIE
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