| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1420 |
|---|
| Symbol | |
|---|
| ID | 3738549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1587966 |
|---|
| End bp | 1588616 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637778704 |
|---|
| Product | protein-L-isoaspartate(D-aspartate) O-methyltransferase |
|---|
| Protein accession | YP_384379 |
|---|
| Protein GI | 78222632 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
|---|
| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.00081136 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.440461 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTG ACATCGCACG AAAACGGATG GTTGAAACGC AAATTATCTC TCGCGGCGTG
AAAGACCGGC GCCTTATAGA GGCGATGCTA AAGGTCCCCC GTCACGTTTT TGTCGAAGAG
GCGATGGCAG CCCAAGCTTA CAGCGACACC CCGCTTCCAA TCGGGGAGAA GCAAACCATC
TCGCAGCCTT ACATGGTTGC TCTCATGACC GAATTGCTTG AGCTTTCGGG CCGGGAGAAG
GTGCTAGAGA TCGGCACTGG CTCAGGGTAT CAAGCGGCAA TACTTGCAAC CCTCGCAGAT
CGCGTTTACA CCGTTGAGCG GATCCGGCCC TTGGCACTCA AGGCTCGTAG GGCACTTGAC
CGTCTCGGCC TCCTGAATGT GAACATAAAA ATTTCTGATG GGACCATCGG TTGGGAGGAA
GAAGCCCCCT TTGACGCCAT CATCGTTACG GCTGGAGCGC CGGATGTCCC GGATAAACTG
GCTGAACAGC TTGCTGTTGG TGGAAGGCTT GTTATTCCTG TAGGGAATCA GTTCGATCAG
GTTCTTGTCA GGATTACCAA GCAGGAAGAT GGTTCTCTCA TCAGAGAAAA TGTAACAGGA
TGCAGATTCG TTAAACTGGT GGGCAAATAC GGATGGGGTA CTGAAGAGTA A
|
|---|
| Protein sequence | MNFDIARKRM VETQIISRGV KDRRLIEAML KVPRHVFVEE AMAAQAYSDT PLPIGEKQTI
SQPYMVALMT ELLELSGREK VLEIGTGSGY QAAILATLAD RVYTVERIRP LALKARRALD
RLGLLNVNIK ISDGTIGWEE EAPFDAIIVT AGAPDVPDKL AEQLAVGGRL VIPVGNQFDQ
VLVRITKQED GSLIRENVTG CRFVKLVGKY GWGTEE
|
|---|
| |