| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1416 |
|---|
| Symbol | pheT |
|---|
| ID | 3738943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1583776 |
|---|
| End bp | 1586181 |
|---|
| Gene Length | 2406 bp |
|---|
| Protein Length | 801 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637778699 |
|---|
| Product | phenylalanyl-tRNA synthetase subunit beta |
|---|
| Protein accession | YP_384375 |
|---|
| Protein GI | 78222628 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
|---|
| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0211445 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 0.563013 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTTA CGTACAACTG GCTCAAGGAA TTCGTTGATT TCGACCTTTC GCCGCAGGAG
CTTTCGGATC TTCTGACCAT GCTTGGTCTC GAAGTGGAAG GAGTTCGCCA TGTTGGGGGC
GGACTTGATG AGGTCGTCGT TGCCGTTGTG GAGGAGAGGT CCCAGCATCC CAACGCGGAT
AAACTTTCCC TCTGCAGGGT GAACAACGGT AAAGAGACGC TTGCCATCGT GTGTGGCGCC
CAGAACTTCA AGGCCGGAGA TAAAGTTGCC CTGGCCCAGA TAGGTGCAGT TCTGCCGGGC
GATTTCAAAA TCAAGCGTTC CAAGATCAGG GGCGAGGAGT CCTGCGGGAT GCTTTGCTCC
GAGAAGGAAC TTGGTCTGGC CGCTGAGTCC GAGGGGATCA TCATTCTTCC GACAGACCTT
CCCCTTGGCG TTCCGGTATT TGATGCCCTT GGCCTCAAAG ATACCATATT CGAGATTGGA
CTAACGCCTA ACAGAGCTGA TTGTCTGAGC GTTGTGGGTA TTGCTCGTGA GATTGCCGCG
AAGCTCGGCA CCACCGTCAA GTATGCCCGT CCCTCGGTGA AGGAATCTGT CGTCCCTATC
AGTGAGCGCG CTCAGGTGAT TGTGGAAGAC TCCGATCTGT GCCCGCGCTA TACGGCCCGT
TACATTGCCG GCTGCTCCAT CGGGCCGTCA CCGGCGTGGC TTGTAAGGCG CCTTGAGGCA
GTGGGAATGC GTTCCATCAA TAATGTGGTG GATGTCACCA ACTATGTCCT CATGGAGTAC
GGCCATCCCC TCCACGCGTT CGATGCCGAT CTCCTTGCCG GCGGTAAGAT TGTTGTGCGT
CGTGCCGCAG CAGGGGAGCG CTTCACCACC CTTGACGGCC AGGAGCGTGT TCTGACGGAG
TCCGACCTGA CGATTCGGGA CGGCGAGAAA GGGGTTGCCC TGGCCGGGAT CATGGGGGGA
GAGAACTCGG AGATTCGTCA GGAGACCTCC AACATCCTTC TGGAGAGCGC TTATTTCAAT
CCGTCTGCGA TCCGTAGAAC CTCGAAGCGT CTCGGTCTCC ACACAGAGTC ATCCCACCGT
TTCGAGCGCG GTGCTGATGT CGACATCCTT GTTACGGCCC TTGACCGTGC CGCCTCGTTG
ATTGCTGAGC TTGCGGGGGG GAGAGTTGCC ACGGGGACCA TTGATGTCTA TCCCCGTCCT
TTGCCCCGCC GCACCGTCAG GTTTCGCGTC GACCAGTGCA ACAGGTTGCT GGGCATTCAG
TTAACTGCCG ATGAGATGGC AGCTATCTTT AATCGCCTTG AGTTTAAAGT TAACGTGGTT
GAACCGGAGC TCTTTGACAT CGACGTTCCC TCCTGCCGGG TCGATATCGA GCGGGAGATC
GATCTTGTTG AGGAGGTGGC ACGGCTTAAC GGCTATAACA ACATTCCGGT CACCATGCCC
AAGGCCCGGG TCTTTTCCGA CCGTCCCACA CGCCACCAGC GCCTCGAAAA ACAGCTGAGG
AATGTCATGG TGGGGCAAGG CTTCAGCGAG GTGATCACCT TTAGCTTCAT GGCTCCCGGG
ATACTTGACA AGCTTCTCTT GGCCCATGAC GACCCCAGGC GCTCCGTTGT GCGGTTGCGC
AACCCCCTTG TGGAAGAGCA GTCGGTGATG CGCACGACGC TTCTTCCCGG ACTTCTCGAT
GTAGCTGCAA GAAACATCAA TTATCGCATG CTCACGCTTC GGCTCTTTGA GTTGCGGCGC
GTCTATCTGC CGGCCGAGGG GCAGGAGTTG CCCCGGGAGC CCCTCCACCT TGCAGGAATC
ATGACCGGCG TTCGCTATCG TGAGGGGTGG AATCAGGAGC GGCATCAGGT TGATTTCTAT
GACGTAAAGG GTGTTATCGA ACATATCCTT GACGAGTTTG CCATCGGATC TGTTGTGTTT
GTCCAGGATC GTCTCGATCC TTATTTTCAC CCGGGCAAGG CATGCTCGAT CCTCTGTGGC
AACGAACTGC TCGGCTCGTT TGGTGAGCTC CATCCCGATA TTCATGACAA TTTCGGCATT
GATCAGTCCG TCTACTATCT TGACCTCGAT TTTGAGAAGC TCGCTATGGT GAGTTCGGAC
AACGTTGCCA TTAAGCCGCC CTCCCGGTTC CCTGATACGT TCCGCGACAT TGCCATGCTT
ATCAAAGATG AAACTCCGGC ATCGACGATC GTGGAGTGCA TCAGTGGACT GAGAATACGT
GAGGTGGAAT GCGCCGAGAT ATTTGACCAC TATAAGGGAT CTCATGTTCC TGAGGGATTC
AAGAGCATTG CGGTTAGAAT CAGGTACCGT TCCCATGAAA GAACACTTGT CGACAACGAG
GTTACACCGC TGCATCAACG TATTGTCGAT ACTCTGGTTA AAAAGTTAGC GGTCACGATA
CGTTAA
|
|---|
| Protein sequence | MIVTYNWLKE FVDFDLSPQE LSDLLTMLGL EVEGVRHVGG GLDEVVVAVV EERSQHPNAD
KLSLCRVNNG KETLAIVCGA QNFKAGDKVA LAQIGAVLPG DFKIKRSKIR GEESCGMLCS
EKELGLAAES EGIIILPTDL PLGVPVFDAL GLKDTIFEIG LTPNRADCLS VVGIAREIAA
KLGTTVKYAR PSVKESVVPI SERAQVIVED SDLCPRYTAR YIAGCSIGPS PAWLVRRLEA
VGMRSINNVV DVTNYVLMEY GHPLHAFDAD LLAGGKIVVR RAAAGERFTT LDGQERVLTE
SDLTIRDGEK GVALAGIMGG ENSEIRQETS NILLESAYFN PSAIRRTSKR LGLHTESSHR
FERGADVDIL VTALDRAASL IAELAGGRVA TGTIDVYPRP LPRRTVRFRV DQCNRLLGIQ
LTADEMAAIF NRLEFKVNVV EPELFDIDVP SCRVDIEREI DLVEEVARLN GYNNIPVTMP
KARVFSDRPT RHQRLEKQLR NVMVGQGFSE VITFSFMAPG ILDKLLLAHD DPRRSVVRLR
NPLVEEQSVM RTTLLPGLLD VAARNINYRM LTLRLFELRR VYLPAEGQEL PREPLHLAGI
MTGVRYREGW NQERHQVDFY DVKGVIEHIL DEFAIGSVVF VQDRLDPYFH PGKACSILCG
NELLGSFGEL HPDIHDNFGI DQSVYYLDLD FEKLAMVSSD NVAIKPPSRF PDTFRDIAML
IKDETPASTI VECISGLRIR EVECAEIFDH YKGSHVPEGF KSIAVRIRYR SHERTLVDNE
VTPLHQRIVD TLVKKLAVTI R
|
|---|
| |