| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1393 |
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| Symbol | |
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| ID | 3738614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1559620 |
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| End bp | 1561326 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637778675 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_384352 |
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| Protein GI | 78222605 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E
[TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.733111 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCCA GCAGACTGGG AGAACTCCTG GTTCGAAATA ACGTCATCAC CAAAGAGCAG
CTCGCCAAGG CCCTTGAGGA GCAGAAGAGC GCAGACGGGC AGCAGCGCCT CGGCTCCATT
CTCATCAAGA ACGGTCTCAT CTCCGAACCT GATCTTACCT CGTTCCTTTC CAAGCAGTAC
GGTGTTCCCT CCATCAACCT GAGCGAATTC GAGGCCGAGC AGGCGGTCGT CAAGATCATC
CCCGCCGATG TGGCCCAGAA GTACCAGATC GTCCCGGTGA ACAGGGCCGG TTCCACCCTG
ATCATCGCCA TGGCCGACCC ATCCAATATC TTCGCCATCG ATGACATCAA GTTCATGACC
GGCTACAACG TGGAGGTGGT GGTGGCCTCC GAGTCGGCCA TCAAGGCGGC CATCGACAAG
TACTACGACC AGTCTGCGTC CCTGGCCGAT GTCATGGGCG ACCTGGAGAT GGACGATCTC
GAGGTGATCG ACACCGACGA CGAGGTGGAT GTATCGTCCC TGGAGCGGGC CACCGAAGAC
GCTCCGGTCG TGAAGCTCGT GAACCTGATC CTGACCGACG CCATCAAGCG GAAGGCCAGC
GATATCCATA TCGAGCCCTA CGAGCGGTCG TTCCGGGTCC GTTACCGGAT TGACGGGGTC
CTCTACGAGG TGATGAAACC CCCCCTGAAG CTCAAGAACG CCATCACATC CCGAATCAAG
ATCATGGCCG AGCTGGACAT CGCCGAACGG CGCCTCCCCC AGGACGGCCG GATCAAGATT
AAGCTTGGCG GCGGCCAGGA CATGGACTAC AGGGTATCGG TTCTTCCGAC CCTCTTCGGG
GAGAAGGTAG TCCTGCGGCT CCTGGATAAG TCGAACTTGC AGCTGGACAT GACCAAGCTG
GGTTACGAGC CCGATGCGCT CCACTATTTC AAGGAGGCGA TCCACAAGCC CTTCGGCATG
GTGCTCGTCA CCGGTCCCAC GGGGAGCGGC AAGACGGTCT CCCTATACTC GGCCTTGGGA
GAGCTCAACA AGACCACTGA AAACATCTCC ACTGCCGAAG ACCCGGTAGA GTTCAACTTT
GCCGGCATCA ACCAGGTGCA GATGCACGAG GATATCGGCC TCAACTTCGC CGCTGCTCTC
CGCTCATTTC TGCGCCAGGA CCCTGACATT ATCATGATCG GCGAGATCCG TGACTTCGAG
ACCGCCGAGA TCGCCATCAA GGCGGCCCTC ACCGGGCACC TGGTCCTCTC CACCCTTCAC
ACCAACGATG CCCCGGCCAC CATCAACCGC CTCCTCAACA TGGGGGTCGA GCCGTTCCTG
GTGGCGTCGG CCGTGAACCT GATTACCGCC CAGCGTCTTG CCCGCCGGGT CTGCTCCGAG
TGCAAACAGC CGGAAGAGAT CCCGATCCAG GCCCTCATCG ATGCCGGTGT TTCCCCCGAC
GAGGCGCCGA GCTACGTCTG CTACAAGGGG ACCGGCTGCG TCAAGTGCAA CAACACCGGC
TACAAGGGAC GGGTTGGCTT CTATCAGGTC ATGCCGATGC TGGAGGAGAT CCGGGAGTTG
ATCCTTAACG GCGCCAATAC CGCGGAGATC AAGCGGGAGT CCATGAGGCT CGGGATCAAG
ACCATGCGCC AGTCGGGGCT TACCAAGCTG AAAGAGGGCG TTACGTCCTT TGAGGAGGTG
CTGCGGGTCA CCGTGGCCGA CGATTAA
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| Protein sequence | MQASRLGELL VRNNVITKEQ LAKALEEQKS ADGQQRLGSI LIKNGLISEP DLTSFLSKQY
GVPSINLSEF EAEQAVVKII PADVAQKYQI VPVNRAGSTL IIAMADPSNI FAIDDIKFMT
GYNVEVVVAS ESAIKAAIDK YYDQSASLAD VMGDLEMDDL EVIDTDDEVD VSSLERATED
APVVKLVNLI LTDAIKRKAS DIHIEPYERS FRVRYRIDGV LYEVMKPPLK LKNAITSRIK
IMAELDIAER RLPQDGRIKI KLGGGQDMDY RVSVLPTLFG EKVVLRLLDK SNLQLDMTKL
GYEPDALHYF KEAIHKPFGM VLVTGPTGSG KTVSLYSALG ELNKTTENIS TAEDPVEFNF
AGINQVQMHE DIGLNFAAAL RSFLRQDPDI IMIGEIRDFE TAEIAIKAAL TGHLVLSTLH
TNDAPATINR LLNMGVEPFL VASAVNLITA QRLARRVCSE CKQPEEIPIQ ALIDAGVSPD
EAPSYVCYKG TGCVKCNNTG YKGRVGFYQV MPMLEEIREL ILNGANTAEI KRESMRLGIK
TMRQSGLTKL KEGVTSFEEV LRVTVADD
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