| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1387 |
|---|
| Symbol | |
|---|
| ID | 3738608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1553226 |
|---|
| End bp | 1554086 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637778669 |
|---|
| Product | Sec-independent periplasmic protein translocase |
|---|
| Protein accession | YP_384346 |
|---|
| Protein GI | 78222599 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
|---|
| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.02646 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.486674 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAG AGAACGGGAA AGTCCTGCCC TTTCTGGAGC ATCTGGCCGA GCTCCGCAAG
CGGCTCATCA TCATAATCGT CACGGTCGTC ATCGGCATGG GCCTCGCCTG GAACCTATCC
GGCGACGTCC TCCACTTCGT CACCAAGCCG ATCACCGGCA AGACGTACCT GACCGACATC
AAGAAGCAGG TCTACCAGGA GGTGGGGAAG CGGTGGCCCG CCGCCTACCA GCAGTTCGAT
CTGGGCAAAG AGGTGGCTGC CGCCCCCAAG GAACGCAAGC TCAACTACAG CGCTCCCCTG
GAGCCTTTTT TCGTCCAGTG CAAAATCTCG ATCATCGCCG GTTTCATCCT GGCGCTTCCC
ATCGTCTTCT ACCAGCTCTG GCTCTTCATC GCGCCGGGGC TCACCCGCAA GGAGAAGCGG
CTGGTGGTTC CCTTCGTGAC GGTGAGCTCC ATCAGCTTTT GTGTCGGAGC GCTCTTTTTC
CTGGTGATCA TCTGGCCGGT CATCATCAAC TTCTCCCTCT CCTACGAGGC TGAGGGGCTC
AACAGCCTTT TCAACATGAG CGCCTACGTC AACTTCTGTC TCCGGTTGAT TTTGCTGTTC
GGCCTCATTT TCGACCTCCC TGTCCTGTTG CTCCTGCTGT CCCGCTTCGG GGTCGTGACC
TATTCCTTCC TGGCCCGCAA CCGGCGCTAC GCGCTCCTGG CCAGTTCCAT TGTCGCCGCA
TTCCATGCGG ACCTCATCAC CATGTTTGTC ATCATGGTCC CCCTCTACGG GATGTACGAG
ATCGGCGTCT GGCTCGTGTT CCTTTTCGGC AAGAGAAAGC CCGCCCCGGC AGAAGCCGAG
GCCGGCGGGG AGGGGGAGTA A
|
|---|
| Protein sequence | MSEENGKVLP FLEHLAELRK RLIIIIVTVV IGMGLAWNLS GDVLHFVTKP ITGKTYLTDI
KKQVYQEVGK RWPAAYQQFD LGKEVAAAPK ERKLNYSAPL EPFFVQCKIS IIAGFILALP
IVFYQLWLFI APGLTRKEKR LVVPFVTVSS ISFCVGALFF LVIIWPVIIN FSLSYEAEGL
NSLFNMSAYV NFCLRLILLF GLIFDLPVLL LLLSRFGVVT YSFLARNRRY ALLASSIVAA
FHADLITMFV IMVPLYGMYE IGVWLVFLFG KRKPAPAEAE AGGEGE
|
|---|
| |