| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1377 |
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| Symbol | |
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| ID | 3740641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 1539404 |
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| End bp | 1541563 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637778659 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_384336 |
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| Protein GI | 78222589 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.010256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAACC GCTTGCTCCT TGCCACGGCC CTGCTCCTCT GTCTGGCTGT CTCCGCCTCC
TCCCAGAACC TTACCCCCAC ACTCGACGAA AAACTCGCCA AGGCCGCCGT GCGGCTCAAG
CTCAAGGACA ACCGGGGGGC CCTGGACAAC GCCACGGACG CAGCCGACTC TCCGGAAAAG
CACCTGATTG CCGGCGTCGC CGCATACCGG CTCGAAGAGT GGGTCAATGC AGCCGAACTG
CTCGGCAAGG CGGCAAAGGA GCTTCCCCTT GTGGCCGACT ACCCGCTCTT CTGGGAGGCT
GATGCCCTGT ATCGCATCGC ACGCCACGAT GAAGCCCTTG AAACCGTGAA GAGGCTCCTC
CATGAACGGC CCGAAAGCCC CCTCGTCCGC CGGGCACGGA TGCTCCAGGC CGACATCCTC
TTTGCCCGCG GCGACCTGAA GGAGGCCCAG GCCGTCTACA TCCGGTTCGT GGAAAGCTAT
CCCTCGGGGA GGGATTCCCT CACCGCCATT TACCAGGCAG CCCGCTGCCG GGAAGGGCTC
GGCGACAAGG CAAAGGCGGT TCAGGAGCTG CGGAATCTCT GGCTCGCCTA CCCTGCCTCG
CCGGTGGCCG AAGACGCCGA GGAGGCTCTG CGCCAACTGG AACGCCAGGG ATTCCCGGCT
GCGCCATACA CCCCCGATGA GCTTTTCCGG AGAGCAAGTA CCCTGTACAG CCTCGGCCGG
TTCCAGCAGG CCGTCAAAAC CTTTGACGCA ATCCCGCTGG CGAACCAGTC GGCCGACTTC
ATTGCCCGGG TCACGTTCAA GAGCGGTCAG GCCCTTTACA AGGCCCGTCA ACGGAAGGAT
GCCGAACGGA CCTTTGCCCG GCTTCTGGAA AAGGAGCTGA AACCGTCCCT GGCCGAGGAG
ACCCGGTTCT GGCATGCCAA AGCTCTTGAG GGGATCGGGA AAAGCGACGA CGCCGTCAAT
GCCTATCTCA AGATAGCCGA GGCCTCGCCG CGGGGAGAGC TGGCCAACGA GGCGCTTCTG
GAGGCAGCCT TCATCCGCAA ATTCCAGGGA CGGTATCAGG AAGAGCTTCC CCTGCTTGAC
CGGCTCCTTG TCGCTGCCAC CGATGTGAAG CTCCGGCAAC GGGCCACGTG GGAGGCGGCG
TGGGCCCGCT ACGGCACGAA GGACTTCCGG GGGGCAGCCG ACGCATTCAA GGCCCTCCAA
ACCATCCCGG AATACCGGGA GCGGGCCCTC TACTGGCATG GCCGCGCCCT TGAAGGGGCG
GGAGACAAGG AGGGGGCTGC CGCTTCGCTA GCCCGCGTCC AGGAAGAATC TCCCCTCTCC
TTTTACGGCC GCCGGGCCTG CACGGCGCTG AATACCATCG AGGAAACCCC TTCCCTGGCG
GCCGAGCCGG CTGCATTGTC CCTGCCGATG CCCGCCGGGT ATGAGCGTAT CAAGCTCCTC
ATTGCCGTGG GACTCCACGA CGAAGCCCGG AAGGAGCTTG CATCCGTCAG GAAGAAAAAC
GGTCTGAAGC AGAAGTCTCT CCTGGGAGTG GCCCGCCTCT ATCTGGAAAT GGAAGACTAC
AACTCGGCCG CAGCCATCTA TCGGGACAAT CTCCCCCGCC GGATTGACAG GGATTCCCTC
ACCCAGTGGG GGCTCCTCTA TCCAAAGGCC TTCCGTGAGG CGGTAACCCG TCAGGCCACC
GACCATGGGG TAGCGGAAGA GCTCGTCTAC GGTGTCATCA GGGCGGAGAG CACCTTCTCG
CCGACTGTCG TCTCCCCCGT GGGGGCCGTG GGGCTCATGC AGCTCATGCC GGCCACCGCC
AGGGCAATGG TGAACGGCAA GGGGGCCAAC ATCTCCACGC GCCTCACCGA TCCCGCCTTC
AACATCAACC TCGGCGTGCG CCACCTGAAA GGGCTGCTCA ACCAGTACCA CGGCAACACA
GTGGCTGCCG TGGCAGCCTA CAACGCCGGC TCCACCCCGG TGGACCGCTG GCGCCGCACC
CTCCCCTACC AACGTGATGA CGAGTTCATC GAAAACATCC CCTACTATGA GACACGGGAA
TACGTGAAGA AGGTCCTCGC CAATGCGGAG ATCTACCGTG CCCTCTACCG GGCAACTCTC
GTAAAGACAC CTGAATCCGC CATCCAGAAG GCGTATTCAG GCGTCCAGAA TTCAAAATAG
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| Protein sequence | MLNRLLLATA LLLCLAVSAS SQNLTPTLDE KLAKAAVRLK LKDNRGALDN ATDAADSPEK
HLIAGVAAYR LEEWVNAAEL LGKAAKELPL VADYPLFWEA DALYRIARHD EALETVKRLL
HERPESPLVR RARMLQADIL FARGDLKEAQ AVYIRFVESY PSGRDSLTAI YQAARCREGL
GDKAKAVQEL RNLWLAYPAS PVAEDAEEAL RQLERQGFPA APYTPDELFR RASTLYSLGR
FQQAVKTFDA IPLANQSADF IARVTFKSGQ ALYKARQRKD AERTFARLLE KELKPSLAEE
TRFWHAKALE GIGKSDDAVN AYLKIAEASP RGELANEALL EAAFIRKFQG RYQEELPLLD
RLLVAATDVK LRQRATWEAA WARYGTKDFR GAADAFKALQ TIPEYRERAL YWHGRALEGA
GDKEGAAASL ARVQEESPLS FYGRRACTAL NTIEETPSLA AEPAALSLPM PAGYERIKLL
IAVGLHDEAR KELASVRKKN GLKQKSLLGV ARLYLEMEDY NSAAAIYRDN LPRRIDRDSL
TQWGLLYPKA FREAVTRQAT DHGVAEELVY GVIRAESTFS PTVVSPVGAV GLMQLMPATA
RAMVNGKGAN ISTRLTDPAF NINLGVRHLK GLLNQYHGNT VAAVAAYNAG STPVDRWRRT
LPYQRDDEFI ENIPYYETRE YVKKVLANAE IYRALYRATL VKTPESAIQK AYSGVQNSK
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