Gene Gmet_1357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1357 
SymbolaspS 
ID3738693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1519234 
End bp1521018 
Gene Length1785 bp 
Protein Length594 aa 
Translation table11 
GC content54% 
IMG OID637778639 
Productaspartyl-tRNA synthetase 
Protein accessionYP_384316 
Protein GI78222569 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0173] Aspartyl-tRNA synthetase 
TIGRFAM ID[TIGR00459] aspartyl-tRNA synthetase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000312068 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.29944e-22 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGAAGATA TTCTGGGTGA ATGGAAGAGA AGTCATTATT GCGGCAATCT GACGAAGGCC 
GATGTGGGGC GCGAGGTTAT CCTCATGGGA TGGATTCTGC GCCGCCGTGA TCATGGGGGC
CTTATTTTCG CCGATCTCCG TGACCGGGAG GGACTCGCCC AGATCGTCTT TGACCCAGCG
AAAAACACCG ATGCCCATCA TAAGGCCGAA GCGATCCGGA ATGAATACGT CGTCGCCGTA
AAAGGGGAGG TGATTCCTCG TCCTGAAGGG ACTGTCAACT CCGCCATGAA GACCGGCGAG
GTCGAAGTTC TCGTTACGGA GTGCAAGATT CTCAATCGCT CAAAGGCTCT ACCTTTTACC
CTTGACGACT ATGTCGACGT CGCTGAGAAC ATCCGTCTCA AGTACCGTTA TCTGGACCTT
CGGCGCCCGG TGCTCCAGCA GAACCTCATT CTCCGCTCGA TGGTTGCCCA GATAACCCGT
CAATATCTCT CAGAAAACGG ATTCCTTGAG ATCGAAACTC CTTTCCTCAC CAAATCAACT
CCGGAAGGTG CCCGTGACTT TCTCGTCCCG TCGCGGATAA ATCAAGGGAA CTTCTATGCG
CTTCCCCAAT CTCCCCAGAT ATTCAAACAG ATTCTGATGA TCTCCGGTTT TGACCGCTAC
TTCCAGATTG TTCGCTGCTT CCGTGACGAG GATCTGCGAG CTGACCGTCA GCCTGAGTTC
ACCCAGATCG ACTGCGAGAT GTCGTTTATC GATCGCGAGG ACATCATTTC GGTCATGGAG
GGGCTCATTG CGAAGATTTT CACGGTTGCC AAGGGGGTGG ATGTTCCCCT CCCCATGCCA
CGCATGACCT ATGCTGAGGC CATTCGCCGC TTCGGCGTCG ATAACCCCGA CGTACGCTTT
GGCCTGGAGC TTGTTGAGCT GACAGATATC GTCAAGGGAG CAGGTTTCAA GGTCTTTGCC
GATGTCGCAG CCTCCGGTGG AATCATCAAG GGACTGAACG CTAAAGGCTG CGCACGGTTT
TCCCGCAAGG AGATCGACGA TCTCACCGAG TTCGCCAAGA TTTACGGTGC TAAAGGGCTT
GCCTACGTCA AGATTGAAGA GGGCCAATGG CATTCCCCCA TTGCCAAGTT TTTCTCTGCC
GAAGAAATCG CTACAATGAA CCAGGCGTTC GGCGCCGAAG ATGGTGATCT TCTTCTCTTT
GTGGCGGACA AGCCGAAGGT GGTCAACGAT TCTCTCGGTA AGCTCCGCAA TCATCTTGCC
GGAATTCTTG GGCTTGCGGA CAAGAATACG TTCAGATTCG TCTGGATCAC CGATTTCCCT
CTCCTTGAGT GGGATGAGGA TGAAAAGCGG TGGGCCGCGG TCCATCATCC TTTCACCGCG
CCCATGGATG AGGATCTGGA GAAAGTCGAA TCGGATCCGG GAAGCTGCCG CGCGAAAGCA
TATGATCTGG TCCTCAATGG CAACGAAATC GGCGGGGGAA GTATCAGGAT TCACCAGCAA
CATGTCCAAT CCCTCATGTT CAGCATGCTT GGACTTTCTG ATGATGAGAC GCGCGCAAAG
TTCGGCTTCC TGCTGGATGC TCTCGAATGC GGTACCCCTC CCCATGGCGG TATTGCCTTC
GGCATGGATC GCCTCATCAT GCTTCTTACG GGCAGCGATT CGATCCGTGA CGTCATTGCC
TTCCCCAAAA CTCAGAAGGG AGCTTGTCTC ATGTCAGAAG CTCCTTCCCC TGTTGATGCA
AAACAACTCA GGGAACTTGC TCTCAAGGTG ACCGTCAAGC AATGA
 
Protein sequence
MEDILGEWKR SHYCGNLTKA DVGREVILMG WILRRRDHGG LIFADLRDRE GLAQIVFDPA 
KNTDAHHKAE AIRNEYVVAV KGEVIPRPEG TVNSAMKTGE VEVLVTECKI LNRSKALPFT
LDDYVDVAEN IRLKYRYLDL RRPVLQQNLI LRSMVAQITR QYLSENGFLE IETPFLTKST
PEGARDFLVP SRINQGNFYA LPQSPQIFKQ ILMISGFDRY FQIVRCFRDE DLRADRQPEF
TQIDCEMSFI DREDIISVME GLIAKIFTVA KGVDVPLPMP RMTYAEAIRR FGVDNPDVRF
GLELVELTDI VKGAGFKVFA DVAASGGIIK GLNAKGCARF SRKEIDDLTE FAKIYGAKGL
AYVKIEEGQW HSPIAKFFSA EEIATMNQAF GAEDGDLLLF VADKPKVVND SLGKLRNHLA
GILGLADKNT FRFVWITDFP LLEWDEDEKR WAAVHHPFTA PMDEDLEKVE SDPGSCRAKA
YDLVLNGNEI GGGSIRIHQQ HVQSLMFSML GLSDDETRAK FGFLLDALEC GTPPHGGIAF
GMDRLIMLLT GSDSIRDVIA FPKTQKGACL MSEAPSPVDA KQLRELALKV TVKQ