Gene Gmet_1354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1354 
Symbol 
ID3738688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1515493 
End bp1517205 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content62% 
IMG OID637778634 
Productprolyl-tRNA synthetase 
Protein accessionYP_384313 
Protein GI78222566 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0442] Prolyl-tRNA synthetase 
TIGRFAM ID[TIGR00409] prolyl-tRNA synthetase, family II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000653795 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value4.6338400000000005e-18 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCTATT CCCAGTATTT CATCCCCACG GTCAAGGAGA CTCCTTCCGA CGCCGAGGTC 
GTTTCCCACA AGCTCATGCT CCGTGCTGGC ATGATCCGCA AGCTCGCCGC CGGCATCTAC
AACTATCTTC CCCTGGGGCT CCGCTCCATC CGCAAGGTCG AACAGATTGT CCGCGAGGAG
ATGAACCGGG CCGGTGCCAT CGAGCTTCTC ATGCCGAGCG TCCAGCCGGC TGAGCTCTGG
CAGGAGTCGA AGCGGTGGGA GCAGTACGGC AAAGAACTTC TCCGCTTCAA GGATCGCAAG
GACGCCGAAT TTTGCCTTGG ACCGACCCAC GAGGAGGTCA TTACCGACCT CGTGCGCCGC
GAGGTGAAGA GCTACCGGCA GCTGCCCTTG AATCTCTATC AGGTACAATC CAAGTTCCGG
GACGAGATCC GTCCCCGGTT CGGTCTCATG CGGGGCCGCG AGTTCATTAT GAAGGATGCC
TATTCCTTTG ACGTGAGCTC CGAGGCGGCT GATACCTCCT ATGACAAGAT GTATCAGGCC
TACCGCCGCA TCTTCCAGCG CTGCGGCCTC AAGTTCCGGG CAGTGGAGGC GGATACCGGC
TCCATCGGCG GCTCCTCGTC CCACGAGTTC ATGGTGCTTG CCGATTCGGG TGAGGATGCC
ATCGTCTCCT GCACCGCCTG CGAGTATGCC GCCAACGTGG AGAAGGCCGA GGCCCGGCTC
TTCCCGTCCG AGCATGCCGA GCCCCGGGAA CTGGAAAAAG TGGAGACCCC CCAGAAGCGG
AGCGTCGAAG AGGTGACCAC CTTCCTCGGC ATTCCCGCCT CGTCTCTGGT GAAGACCCTC
CTCTGCGTTG CTGACGGAGA GCCGGTGGCA GCGTTGGTGC GTGGCGACCA CGACCTGAAC
GAGATCAAGC TCAAGCACCT TCTCGGCTGC GAAGAGTTGG AGATGGCCAG TGAGGAGATC
GTGGAGCGGG TCACCGGCGC TCCCGTCGGC TTTGCCGGCC CCGTGGGGTT GAAGATCAAG
ATCGTCGCCG ACTTGACGAT CCAGGGAATG AAAAACTTTG TCACCGGCGG CAATGCCCGT
GATCTCCATT TCAAGAACGT GAACATCGGT AGGGATTTTA CCCCTGCGCT CATTGCCGAC
ATCCGCAACG TGGTCCACGG CGACCCCTGT CCCCGCTGCG AGGCCGGGCA CCTGGAGATG
TGGCGCGGCA TCGAGGTCGG GCACGTCTTC AAGCTGGGAA CCAAGTACTC CGAGTCCCTC
CGGGCGACCT TTCTGGACGC CGACGGCAAG GAGCAGGTCA TCTTCATGGG ATGCTACGGC
ATCGGCATCA GTCGGACCGT GGCCGCCTGC ATCGAGCAGA ACCACGACGC CGACGGCATC
ATCTTCCCGA TCCCCATCGC GCCGTTCCAC TGCATCATCT CGGCCGTCAG CACGAAGGAT
GCGGAGGTCG TGGCCGCGTG CGATGAACTC TATCGTGCCC TCACTGCTGT CGGCGTCGAG
GTTCTCTTTG ACGACCGCGA CGAGCGCCCC GGTTCCAAGT TCAAGGACGC CGACCTTATC
GGCATCCCGC TCAGGATAGT CGTGGGGAGC AAGAACCTGG CGGAAGGTAA GGTTGAACTC
AAATCCCGCA AGGGCGGTGA GGTTTCTCTC CTCCCCCTGG CCGAGGCAGT GGAGACGGTC
AAGGGGCTCG TCGTTGCAGC TCTCAATCAG TAA
 
Protein sequence
MRYSQYFIPT VKETPSDAEV VSHKLMLRAG MIRKLAAGIY NYLPLGLRSI RKVEQIVREE 
MNRAGAIELL MPSVQPAELW QESKRWEQYG KELLRFKDRK DAEFCLGPTH EEVITDLVRR
EVKSYRQLPL NLYQVQSKFR DEIRPRFGLM RGREFIMKDA YSFDVSSEAA DTSYDKMYQA
YRRIFQRCGL KFRAVEADTG SIGGSSSHEF MVLADSGEDA IVSCTACEYA ANVEKAEARL
FPSEHAEPRE LEKVETPQKR SVEEVTTFLG IPASSLVKTL LCVADGEPVA ALVRGDHDLN
EIKLKHLLGC EELEMASEEI VERVTGAPVG FAGPVGLKIK IVADLTIQGM KNFVTGGNAR
DLHFKNVNIG RDFTPALIAD IRNVVHGDPC PRCEAGHLEM WRGIEVGHVF KLGTKYSESL
RATFLDADGK EQVIFMGCYG IGISRTVAAC IEQNHDADGI IFPIPIAPFH CIISAVSTKD
AEVVAACDEL YRALTAVGVE VLFDDRDERP GSKFKDADLI GIPLRIVVGS KNLAEGKVEL
KSRKGGEVSL LPLAEAVETV KGLVVAALNQ