Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1354 |
Symbol | |
ID | 3738688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1515493 |
End bp | 1517205 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637778634 |
Product | prolyl-tRNA synthetase |
Protein accession | YP_384313 |
Protein GI | 78222566 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0442] Prolyl-tRNA synthetase |
TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000653795 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 4.6338400000000005e-18 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCTATT CCCAGTATTT CATCCCCACG GTCAAGGAGA CTCCTTCCGA CGCCGAGGTC GTTTCCCACA AGCTCATGCT CCGTGCTGGC ATGATCCGCA AGCTCGCCGC CGGCATCTAC AACTATCTTC CCCTGGGGCT CCGCTCCATC CGCAAGGTCG AACAGATTGT CCGCGAGGAG ATGAACCGGG CCGGTGCCAT CGAGCTTCTC ATGCCGAGCG TCCAGCCGGC TGAGCTCTGG CAGGAGTCGA AGCGGTGGGA GCAGTACGGC AAAGAACTTC TCCGCTTCAA GGATCGCAAG GACGCCGAAT TTTGCCTTGG ACCGACCCAC GAGGAGGTCA TTACCGACCT CGTGCGCCGC GAGGTGAAGA GCTACCGGCA GCTGCCCTTG AATCTCTATC AGGTACAATC CAAGTTCCGG GACGAGATCC GTCCCCGGTT CGGTCTCATG CGGGGCCGCG AGTTCATTAT GAAGGATGCC TATTCCTTTG ACGTGAGCTC CGAGGCGGCT GATACCTCCT ATGACAAGAT GTATCAGGCC TACCGCCGCA TCTTCCAGCG CTGCGGCCTC AAGTTCCGGG CAGTGGAGGC GGATACCGGC TCCATCGGCG GCTCCTCGTC CCACGAGTTC ATGGTGCTTG CCGATTCGGG TGAGGATGCC ATCGTCTCCT GCACCGCCTG CGAGTATGCC GCCAACGTGG AGAAGGCCGA GGCCCGGCTC TTCCCGTCCG AGCATGCCGA GCCCCGGGAA CTGGAAAAAG TGGAGACCCC CCAGAAGCGG AGCGTCGAAG AGGTGACCAC CTTCCTCGGC ATTCCCGCCT CGTCTCTGGT GAAGACCCTC CTCTGCGTTG CTGACGGAGA GCCGGTGGCA GCGTTGGTGC GTGGCGACCA CGACCTGAAC GAGATCAAGC TCAAGCACCT TCTCGGCTGC GAAGAGTTGG AGATGGCCAG TGAGGAGATC GTGGAGCGGG TCACCGGCGC TCCCGTCGGC TTTGCCGGCC CCGTGGGGTT GAAGATCAAG ATCGTCGCCG ACTTGACGAT CCAGGGAATG AAAAACTTTG TCACCGGCGG CAATGCCCGT GATCTCCATT TCAAGAACGT GAACATCGGT AGGGATTTTA CCCCTGCGCT CATTGCCGAC ATCCGCAACG TGGTCCACGG CGACCCCTGT CCCCGCTGCG AGGCCGGGCA CCTGGAGATG TGGCGCGGCA TCGAGGTCGG GCACGTCTTC AAGCTGGGAA CCAAGTACTC CGAGTCCCTC CGGGCGACCT TTCTGGACGC CGACGGCAAG GAGCAGGTCA TCTTCATGGG ATGCTACGGC ATCGGCATCA GTCGGACCGT GGCCGCCTGC ATCGAGCAGA ACCACGACGC CGACGGCATC ATCTTCCCGA TCCCCATCGC GCCGTTCCAC TGCATCATCT CGGCCGTCAG CACGAAGGAT GCGGAGGTCG TGGCCGCGTG CGATGAACTC TATCGTGCCC TCACTGCTGT CGGCGTCGAG GTTCTCTTTG ACGACCGCGA CGAGCGCCCC GGTTCCAAGT TCAAGGACGC CGACCTTATC GGCATCCCGC TCAGGATAGT CGTGGGGAGC AAGAACCTGG CGGAAGGTAA GGTTGAACTC AAATCCCGCA AGGGCGGTGA GGTTTCTCTC CTCCCCCTGG CCGAGGCAGT GGAGACGGTC AAGGGGCTCG TCGTTGCAGC TCTCAATCAG TAA
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Protein sequence | MRYSQYFIPT VKETPSDAEV VSHKLMLRAG MIRKLAAGIY NYLPLGLRSI RKVEQIVREE MNRAGAIELL MPSVQPAELW QESKRWEQYG KELLRFKDRK DAEFCLGPTH EEVITDLVRR EVKSYRQLPL NLYQVQSKFR DEIRPRFGLM RGREFIMKDA YSFDVSSEAA DTSYDKMYQA YRRIFQRCGL KFRAVEADTG SIGGSSSHEF MVLADSGEDA IVSCTACEYA ANVEKAEARL FPSEHAEPRE LEKVETPQKR SVEEVTTFLG IPASSLVKTL LCVADGEPVA ALVRGDHDLN EIKLKHLLGC EELEMASEEI VERVTGAPVG FAGPVGLKIK IVADLTIQGM KNFVTGGNAR DLHFKNVNIG RDFTPALIAD IRNVVHGDPC PRCEAGHLEM WRGIEVGHVF KLGTKYSESL RATFLDADGK EQVIFMGCYG IGISRTVAAC IEQNHDADGI IFPIPIAPFH CIISAVSTKD AEVVAACDEL YRALTAVGVE VLFDDRDERP GSKFKDADLI GIPLRIVVGS KNLAEGKVEL KSRKGGEVSL LPLAEAVETV KGLVVAALNQ
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