Gene Gmet_1350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1350 
Symbol 
ID3738684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1511428 
End bp1512150 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content62% 
IMG OID637778630 
Productpeptidase M23B 
Protein accessionYP_384309 
Protein GI78222562 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0000125735 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000000000113309 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAAAGA GCACCCTCAT AATCGCTGCA CTCGTTATTG TCCTCCCCCG GGAAGGAGTC 
GCCGACATCT ACCGCTATGT GGATGAAGAG GGAGTGGTCT GCTTCACCGA TGCCCCCGGG
AAGAGCGGTG CGACGCTGGT CATGAAGGAG CGGCCTGCCC CTCGCCGCGG CAGACGGAGC
ATACCCGGCC ATCTGGCCGC CACCGGCATC GGAGAAAAGC CGTCACAGGC GTCATCTCCC
ACGTTTTCCC CTACCCTTCC CGTCCACGGG AGAATCTCCT CACTGGTTGG GCTCCGCCAC
GACCCCATCA ACGGCAACCT CCGCGAACAC CACGGAATCG ACATCGCCAT TGCCGAAGGA
ACCGCCGTCC GTCCGGTGGC TCCGGGAAGG GTGGTCTTTG CCGGATTGCG CGGTGGCTAT
GGCAACATGG TCATCGTGGA CCACGGCGAC GGAACCATTA CTCTCTATGC CCACAATTCC
GTCAATCTTG TGGCTGAAAA TGACTCAGTG GACGGCACCT CCCCCATCGC CCTCTCGGGC
TCCACGGGGC GCTCAACGGG CCCCCACCTC CACTTCGAAG CATGGCGGGG CGAAACCAAC
ATCACCTCCA CCTTCCTGGC TGGGGGACCG TCCATGGGGA GTGCCTCCAA CCGGCGCAAA
GTCGATGCCA TCCGTCGCAT CGTCCAGGCG GACGGGACCC TCTATTTAAG CAATATCCAC
TGA
 
Protein sequence
MRKSTLIIAA LVIVLPREGV ADIYRYVDEE GVVCFTDAPG KSGATLVMKE RPAPRRGRRS 
IPGHLAATGI GEKPSQASSP TFSPTLPVHG RISSLVGLRH DPINGNLREH HGIDIAIAEG
TAVRPVAPGR VVFAGLRGGY GNMVIVDHGD GTITLYAHNS VNLVAENDSV DGTSPIALSG
STGRSTGPHL HFEAWRGETN ITSTFLAGGP SMGSASNRRK VDAIRRIVQA DGTLYLSNIH