| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1349 |
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| Symbol | |
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| ID | 3738489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1508874 |
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| End bp | 1511402 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637778629 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_384308 |
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| Protein GI | 78222561 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.228837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00000000348515 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTCTTC CCATTGAAGA CATCCTGCCT CAGCTGACAT CCTCCCTTCA GACCCACAAT
TCCGTGGTCA TCCAGGCTCC GCCCGGAGCC GGCAAGACGA CGCGTGTTCC CCTTGCACTC
CTGGACGCCC CATGGCTCCG GGGGAAGGGG ATTGTCATGC TCGAGCCGCG ACGGCTCGCG
GCCACCAATG CCGCCCGCTG GATGGCGTCC ATCCTTGGCG AGGAAGCGGG AGGGACGGTG
GGCTACACGA TCCGCTTCGA CCGGAAGGTG TCGCGCCAAA CCCGGGTGGA GGTGGTTACC
GAGGGAGTGC TCACTCGCCG GCTCCAGACA GACCCGCTCC TCGAGGGGGT TGGCGCGGTG
ATCTTCGACG AGTTCCACGA GCGGAGCATC CATGCGGACC TGGCCCTGGC CCTCTGTCGC
GACGTGCAGC AGGGATTGCG GGAGGAGCTG CGGATCATCG TCATGTCGGC GACCCTCGAA
GCGGCGCCGG TGGCAGGGCT TCTGGGGGAC GCGCCGATCA TTACGAGCGA GGGGCGGAGT
TTTTCCGTGG AGATCCGCCA CCTTCCCGAG GATTCCCGCG ACCCCCTCCC GATTGCCGTC
TCCCGCGCCA TTCGCACGGC CCTTGCTGTC ACAGAGGGGG ACATCCTCGC CTTTCTGCCG
GGAGTAGGGG AAATCCGGCG TTGTCACCAA TTCCTGCAGG AAGGGGAAGC GCTCCATTCT
GCGCCTCTCA TTGCTCCCCT CTATGGCGAC CTCCCCTTTG CCGAACAGGA ACGGGCCATT
CTTTCCGCCG ACCGGCGCAA GGTGGTGCTC GCCACCAATA TAGCGGAAAC GAGTCTCACC
ATCGAAGGGG TGCGGGTGGT CATCGACAGC GGTTTTTGCC GCCGGCTGCG GTTCGATCCC
GGGTCGGGGC TTGACCGGCT CGTCACGGAG CGGATTTCGG CCGCCTCCGC CACCCAGCGG
GCAGGGCGGG CCGGCCGGCT CGGTCCTGGC ACCTGCTTCC GGCTCTGGTC CGAACACACT
CAGCGGACCC TCATTCCCGC CGACCCTCCC GAGATCGCCA CCTCCGACCT GACACCGGTG
GCCCTTGACC TGGCTGCCTG GGGGGTGACC GATGCCTCCA CCCTTTCGTG GCTCACGCCC
CCTCCGAAAT CCTCTTTGGA GGAGGGGCGA CAGCTCCTTG TTCAGCTTGA AGCCCTCGAC
CGCCACGGCA TGATCACCGA GGTTGGCCGA CGGATGGCGG AGCTGCCGGT CCATCCCCGC
CTCGCCCACA TGCTTACCAG GGCCGTCGGG AGGGGCGTTG GTCCCCTTGC CTGTGACGTG
GCGGCGATCA TGTCGGAGCG TGACCTCGTG AAGGCTTCCG GAGGGACGGC GTTGGAGCGG
AGCGAAAGCG ACATGCTCGT TCGGGTTGAG GTGCTGAATG GGTGGCGGAA GGGGCGGCGC
TTTGCAGGGG GGGATGCCGC GACCTGCCGC ACCGTCGACC GCTCTGCCCA GCATCTGCGC
AGGTTGCTCA ACATCGGGAA GGAGCATGCG GTTGTCGGCG CGGATGCCGA AACGGTGGGC
CTCCTGCTCG CCTGGGCCTA CCCGGATCGA ATCGCGCTGC GCCGCGGTGA CGGCGGGCGC
CGGTATCTCC TTGCCGGAGG ACGCGGGGCG CTTCTCTCCG AACGAAGCTC GGTCCATGAC
GAGCCGCTTC TGGTGGCCCA TGTGGTGGAG CGGGGGGAGA GGGGAGACGA CCTGATTCGC
CAGGCAAGTG TTCTGACGCT GGAAACCTTC AGAAGGGAGT TCTCCGACGG CATCGTCACC
GGGAGGAACG TGTTCTGGGA TGAGCGGGAA GGGAGGGTGG TAAGCTGCGA GGAGGAGCGG
TTCGGTGCCC TCGTCCTCGG AAGCAGGCCA TCCGCTGCCA CGGCTGACGA GGTGCGAAGC
GCACTGGTGG AGGGAATCGT GAGGGGGCCC GGCCTGTCAG CCCTTAGCTG GTCCACGGCC
GCACGCCGGT TCAGGGCGCG GGTGCGGCTC ATGGCCCGCG TTTTTCCCGA CGAGGGATGG
CCCAATCTCT CCGATGAGGC CCTCCTGGCA ACCCTTGGCG AGTGGCTGGG ACCTCAACTG
GACGGGGTGC GGCGACTTGC CGACGCGGCT GCGGTGGACC TGCTCCCTCC CCTGCAGGGG
CTCCTCCCCT GGAATCTGCT CCGCCGCCTC GATGAAGGGG CGCCGACCCA TCTGGTGGTT
CCGAGCGGTT CGCGGGTCCC TATCGATTAC GGAGATGACG GGACACCGAC CCTGGCGGTG
AAGCTCCAGG AGATGTTCGG CCTTGCCGAG ACCCCCACCG TGGCGTGGGG GAGGGTGCCG
GTGGTTGTCC ATCTCTTGTC GCCGGCTGGC CGCCCCCTTC AGGTGACCGC AGACCTGCGG
GGGTTCTGGA ACGGGGCCTA CCAGGAGGTG AAAAAGGAAA TGCGGGGACG CTACCCAAAG
CACCCGTGGC CCGATGACCC GTGGACTGCC ATACCCACGC GCAGGACAAA GGGGCATGAG
AGAAAATAG
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| Protein sequence | MLLPIEDILP QLTSSLQTHN SVVIQAPPGA GKTTRVPLAL LDAPWLRGKG IVMLEPRRLA
ATNAARWMAS ILGEEAGGTV GYTIRFDRKV SRQTRVEVVT EGVLTRRLQT DPLLEGVGAV
IFDEFHERSI HADLALALCR DVQQGLREEL RIIVMSATLE AAPVAGLLGD APIITSEGRS
FSVEIRHLPE DSRDPLPIAV SRAIRTALAV TEGDILAFLP GVGEIRRCHQ FLQEGEALHS
APLIAPLYGD LPFAEQERAI LSADRRKVVL ATNIAETSLT IEGVRVVIDS GFCRRLRFDP
GSGLDRLVTE RISAASATQR AGRAGRLGPG TCFRLWSEHT QRTLIPADPP EIATSDLTPV
ALDLAAWGVT DASTLSWLTP PPKSSLEEGR QLLVQLEALD RHGMITEVGR RMAELPVHPR
LAHMLTRAVG RGVGPLACDV AAIMSERDLV KASGGTALER SESDMLVRVE VLNGWRKGRR
FAGGDAATCR TVDRSAQHLR RLLNIGKEHA VVGADAETVG LLLAWAYPDR IALRRGDGGR
RYLLAGGRGA LLSERSSVHD EPLLVAHVVE RGERGDDLIR QASVLTLETF RREFSDGIVT
GRNVFWDERE GRVVSCEEER FGALVLGSRP SAATADEVRS ALVEGIVRGP GLSALSWSTA
ARRFRARVRL MARVFPDEGW PNLSDEALLA TLGEWLGPQL DGVRRLADAA AVDLLPPLQG
LLPWNLLRRL DEGAPTHLVV PSGSRVPIDY GDDGTPTLAV KLQEMFGLAE TPTVAWGRVP
VVVHLLSPAG RPLQVTADLR GFWNGAYQEV KKEMRGRYPK HPWPDDPWTA IPTRRTKGHE
RK
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