Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1308 |
Symbol | |
ID | 3739477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1469855 |
End bp | 1470598 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637778588 |
Product | thiamine pyrophosphate enzyme, C-terminal TPP-binding |
Protein accession | YP_384269 |
Protein GI | 78222522 |
COG category | [C] Energy production and conversion |
COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0000511806 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.0683666 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACAGG TCTTCAAAAA ACCGGTCAGT CTCAAGGATG TCCAGACCCA CTTTTGCCCC GGCTGCCATC ACGGCACCTT TCACCGTCTC GTGGCCGAGG CCATGGACGA GTTCGGCGTC CAGAAGAGGA CCATCGGCGT CGCGTCGGTT GGGTGTTCGG TCTTTCTCTA CGGCTATTTT GATATTGACG TGGTCGAAGC TCCCCATGGC CGGGCTCCGG CGGTGGCCAC CGGCGTCAAG CGTGCCCGGC CCGACGCCTT TGTCTTCACC TACCAGGGTG ACGGCGACCT GGCCGCCATC GGCACCTCCG AGATCATCCA CGCCGCCAAC CGTGGCGAGG ACATGACGGT CATCTTCGTC AACAACACCA CCTATGGCAT GACCGGTGGC CAGATGGCCC CCACTACCCT TGTGGGGCAG AGGACTTCAA CCTCTCCCTA CGGGAGGAAC CAGGGGAAGG ATGGCGCCCC CATCAGGATG GCCGAGCTCC TTGCCCAACT CGAGGGGGTT GCCTTCTCGG CCAGGGTGGC GGTCAACAAT CCCAAGAACC TCATGGACGC CAAGCGGCAG ATCAAGAAGG CGTTCCGGTA CCAGGCGGAG GGGAAAGGGT TCTCCTTCAT CGAAGCCCTC TCGTCTTGCC CCACCAACTG GGGGATGGAT CCGATCAAGG CAAACGAGCG CGTTGGTACT GAAATGTGCG CCTATTTTCC GCTTGGAGTA TTCAAGAACG CTGCTGACCT CTAG
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Protein sequence | MQQVFKKPVS LKDVQTHFCP GCHHGTFHRL VAEAMDEFGV QKRTIGVASV GCSVFLYGYF DIDVVEAPHG RAPAVATGVK RARPDAFVFT YQGDGDLAAI GTSEIIHAAN RGEDMTVIFV NNTTYGMTGG QMAPTTLVGQ RTSTSPYGRN QGKDGAPIRM AELLAQLEGV AFSARVAVNN PKNLMDAKRQ IKKAFRYQAE GKGFSFIEAL SSCPTNWGMD PIKANERVGT EMCAYFPLGV FKNAADL
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