| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1303 |
|---|
| Symbol | |
|---|
| ID | 3739472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1465823 |
|---|
| End bp | 1466848 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637778583 |
|---|
| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
|---|
| Protein accession | YP_384264 |
|---|
| Protein GI | 78222517 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
|---|
| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0000372427 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.0123403 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCATTC TCACGATCGA AACATCCTGC GACGAAACCG CCGCCGCGGT GGTCCGCGAC
GGGCGCACGG TGCTGTCGAG CATCGTTGCG ACCCAGGTGA AGGACCATGC CGTCTACGGG
GGGGTTGTCC CTGAGATAGC CTCCCGCAAA CATCTGGAGA GCATCCCGGT CGTCATCGAC
GAAGCCCTCC GCACTGCTTC GGTCTCCCTC GACGCCATCG AGGGGGTCGC CGTGACCCAG
GGGCCGGGAC TGGCCGGGGC ACTTCTGGTG GGTACCGCCG TTGCCAAGGC CATCGCCTTT
GCCCGCCGGC TCCCCATCGT TGGGGTGAAC CATATCGAAG GGCACCTCTC GGCCATTTTC
CTGGAGCGAG AGGTGGCGTT TCCCTTCGTG GCCCTCGCCG TCTCGGGGGG GCATACCCAT
CTCTACCGGG TCGACGGCAT CGGCCGCTAC ACCACCCTCG GCCAGACCCG CGACGACGCT
GCCGGCGAGG CCTTCGACAA AGTCGCAAAG CTCTTGGGAC TCCCCTATCC GGGCGGGGTT
GAGATCGATC GCCTTGCCGC CGAGGGGGAC CCAGCCAGCA TTTCCTTCCC CCGGCCGCTC
CTCCACGACG GCAGCTTCAA CTTCAGCTTC AGCGGCCTCA AGACTGCGGT TCTGAACCAT
GTCCGCAAGA ATCCGGTCCA GGAGGATGGC CAGCAACTCC GGGACCTCTG CGCTTCGTTT
CAACGGGCCG CCTGCGACGT GCTCGTGACG AAAACGCTCC TTGCCGCAGA GACCGAGGGG
ATCGGTCGGG TCGTGGTTGC CGGCGGCGTT GCCTGCAATA GCGCCCTGCG CCGCGACATG
GCCCGGGAGG CTGCTGACAG GGGAATCGAG CTCGCCATCC CTTCTCCTTC CCTCTGTAGC
GATAACGCCG CCATGCTGGC GGTTCCCGGT GATTTCTACC TCTCCCGGGG GATCAGCGAC
GGCCTCTCCC TGGACGCCTT GGTAAACTGG CCCTTGGATA CGATCCGGAC GAGGCTGGAG
TCGTGA
|
|---|
| Protein sequence | MLILTIETSC DETAAAVVRD GRTVLSSIVA TQVKDHAVYG GVVPEIASRK HLESIPVVID
EALRTASVSL DAIEGVAVTQ GPGLAGALLV GTAVAKAIAF ARRLPIVGVN HIEGHLSAIF
LEREVAFPFV ALAVSGGHTH LYRVDGIGRY TTLGQTRDDA AGEAFDKVAK LLGLPYPGGV
EIDRLAAEGD PASISFPRPL LHDGSFNFSF SGLKTAVLNH VRKNPVQEDG QQLRDLCASF
QRAACDVLVT KTLLAAETEG IGRVVVAGGV ACNSALRRDM AREAADRGIE LAIPSPSLCS
DNAAMLAVPG DFYLSRGISD GLSLDALVNW PLDTIRTRLE S
|
|---|
| |