| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1298 |
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| Symbol | |
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| ID | 3739467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1460524 |
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| End bp | 1461585 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637778578 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_384259 |
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| Protein GI | 78222512 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.000090214 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.00354722 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAACATA GCTTGAAATG CACCATTGAG CTGCTCGAAG AGGAAGTCAG CGCCCTCAGG
GAGTTGATTG AGGTGGCGAG GATGGTGGTT TCCACCCTCG AACTTGATCA GGTCCTCCTG
GAGATACTGA CCAGCGCGAT GCGCTTTGCC GACGCCTCCG CCGGAAGCAT TGTCCTCTAC
GACACCGTTC AGGGGGGACT GACTCTCCAC GCCCACCAGG GGTTTACCCC CGAATTCGTC
TTGGCCGAGC GGTGGGAAAT CCGCCCTGGA GGGGTCACTG AACGGGTTAT CTCCGGTGGC
GAGATCCTGT TCGTCAACGA CACCGAAGAT AACCCCCTCC TTGTCGACCC CATTGTCATC
AGGGAGGGGA TCAGATCTCA GGCCTGCATT CCCCTTAAAG TGCAGAGCCG GCTTGCGGGC
ATTCTCTACC TGTGCGATTT TGTCCCCCGG GAGTTCGATC GGGAGAGAAT GAAACTTCTG
GACGTCCTCG CCTCCTTTGC CGCCATGGCC ATCGATAATG CTCAGCTCCA TGAGCGGACC
CGGCTCATGG CCATAACCGA CGCCCTGACC GGTCTTTACA ACCGGCGCTA CTTTCAGCAG
ATGTTCAGTC GGGAACTGAA CCGGGCCAAG CGTTACGGCA ACCCCCTCTC ACTGATCATG
ATGGACGTGG ATGACTTCAA GAAGTTCAAT GATACCTATG GACATCCCCT TGGCGACAAG
CTCCTAGGGA GCATGGGAGA TATTCTCACG GAGGCGCTGC GCAATACCGA TTTTGCCTTT
CGCTACGGGG GCGAGGAGTT TATCGTGCTC TTGCCGGAAA CCGACTTTTC CAGCGCGCTT
AATGTTGCGG AGCGGCTCCG GGAGTCCGTG GAACAGAAGA GTGTCGACGA AATGCGAGGG
ATCGCTCTCA ATGCCGTAAC CGTAAGTGTC GGCGTAGTCT CCTATCCCCA GGACGGCGAG
ACCAGCGACG ACCTCCTCAA TGGGGTGGAT GAACTCCTCT ATCGGGCCAA GGAGTATGGC
AAGAACAGGG TCTACTACCG GACTATGGGA GAAAAACCAT GA
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| Protein sequence | MEHSLKCTIE LLEEEVSALR ELIEVARMVV STLELDQVLL EILTSAMRFA DASAGSIVLY
DTVQGGLTLH AHQGFTPEFV LAERWEIRPG GVTERVISGG EILFVNDTED NPLLVDPIVI
REGIRSQACI PLKVQSRLAG ILYLCDFVPR EFDRERMKLL DVLASFAAMA IDNAQLHERT
RLMAITDALT GLYNRRYFQQ MFSRELNRAK RYGNPLSLIM MDVDDFKKFN DTYGHPLGDK
LLGSMGDILT EALRNTDFAF RYGGEEFIVL LPETDFSSAL NVAERLRESV EQKSVDEMRG
IALNAVTVSV GVVSYPQDGE TSDDLLNGVD ELLYRAKEYG KNRVYYRTMG EKP
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