Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1297 |
Symbol | |
ID | 3739466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 1458039 |
End bp | 1460267 |
Gene Length | 2229 bp |
Protein Length | 742 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637778577 |
Product | ribonucleotide-diphosphate reductase subunit alpha |
Protein accession | YP_384258 |
Protein GI | 78222511 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000197456 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.000842098 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAGAAA CGAAGACGAC AGTGGATATC CCCGGCCTTT CGAAGAACGC CCGCACCGTG CTCGAGAAGC GATACCTCAA GCGAGACACT GACGGGAGAG TCCTCGAAAC TCCCGCCGAC ATGTTCCGGC GCGTGGCCGA GGCCATTGCC GTTGCTGACC GTAATTTCGA CAAGAAGGCC GACACCAAGG CCCTGGCCCA GAAGTTCTAC GACCTGATGA CCTCCTTCGA GTTCCTCCCC AACTCCCCCA CCCTCATGAA CGCGGGGCGC GAGCTGGGCC AGCTCTCCGC CTGCTTCGTC CTCCCTGTGG GGGACTCCAT GGAGGAGATC TTCGACGCGG TCAAGTACAC GGCCCTCATC CACAAGTCCG GCGGCGGCAC CGGCTTTTCC TTCTCGCGGC TGCGTCCGGC CAACGACGTG GTCCGTTCCA CCTCGGGCAT CTCCAGCGGC CCCATCTCGT TCATGCGGGT CTTCGACGCC GCCACCGAAA CCATCAAGCA GGGGGGAACC CGGCGCGGCG CCAACATGGG GATCCTCCGC GTGGATCATC CGGATATCAT GGACTTCATC ATGTGCAAGG ATGACCAGAA GCACCTCAAC AACTTCAACA TCTCCGTGGG GCTCACCGAG GCCTTCATGG AGGCGGTGGA GAGGGACGCC GATTACGATC TGCGCAACCC CCGTGACGGG AAGCCCTGCG GGACCCTCAA CGCCCGCAAG GTCTTCAGCC GCATCGTGAA GCAGGCCTGG AAAAACGGCG AGCCGGGAAT CATCTTCCTG GACCGCCTCA ACAAGGACAA CCCGACTCCC CACATCGGCG AGATCGAGTC CACCAACCCC TGCGGCGAGC AGCCGCTCCT CCCCTACGAG TCATGCAACC TGGGCTCCAT CAACCTGGGG AAGATGGTGA ATAACGGCGA CGTGGACTGG AAGCGCCTGC GGGAGGTCAT CCGCCTGGGA GTCCACTTCC TGGACAACGT CATCGAGGTG AACAACTACC CCCTCCCCCA GATCAACGAC ATGACCCGCT CCAACCGCAA GATCGGCCTC GGCGTCATGG GGTGGGCAGA CATGCTGATC CTCCTGGGGA TCCCCTACAG CTCCCCGGAG GCCATCAGCC TCGGCGAGAA GGTGATGCGT TTCATTAACG ACGAGGGGCA CGCCTATTCC CGCGAACTGG CCGCCGTGCG GGGAGCGTTC CCGAACTTCG TGGGTTCCAC CTTTGACCGG CCGGGAGAAG GCCCCATCCG CAACGCCACG GTGACCACCA TCGCCCCCAC CGGCACCATC TCCATCATTG CCAACGCATC CAGCGGTGTG GAACCCCTCT TCGCAGTCTC CTTCGTGCGC CAGGTCCTCG ACAAGAACAT CCTCGTGGAG GTAAACCCCA TTTTCGAGGA GATTGCCCGG GATCAGGGCT TCTATTCCGA GGAGCTCATG CAGAAGATCG CCCAGCACGG CACCGTCCAC GACCTGGCCG AGATTCCCGA GGATATCCGC AAGGTCTTCG TGACCGCCCA CGACATCACC CCGGAAGACC ACATCGAGAT GCAGGCCGCC TTCCAGAAAT ACACCGACAA CGCCGTCTCC AAGACGGTCA ACTTCCCCAA CGCCGCCACC ATCGAAGAGG TGGAGAAAGT CTACCGCCTG GCCTACAAAC TGGAGTGCAA GGGGGTCACC ATCTACCGCG ACGGCTCCCG GGACGAGCAG GTCCTCTCCA CAGGCGCCAA GGAGGAAAAG GAGAAAGTTG TCCAGACGGA GGAGAAACGG GCCGTGAAGC GGGACCGTCC CAAGGCCCTC AAGGGATGGA CCTACCAGAT GCAGACCGGC TGCGGCCCAC TCTATGTCAC CGTCAACGAG GACAAGGCCG GGCTTTTCGA GCTCTTCACC ACCATGGGGA AGGCGGGCGG GTGCGCCTCC TCCCAGTGCG AGGCCATCGG CCGCATGGTG TCCCTCGCCT GGCGCAGCGG CGTCCAGGCC CGGCAGGTGA TCAAGCAGCT TCTCGGCATC TCCTGCCACC TCCCCGCGGG CTTCGGCGAC AACAAGGTTC TTTCCTGCGC CGACGCCGTG GCCAGGGCGA TCCAGGCCCA CATGCAGGCT GCCGGCTACG ATGTGGGGCT CGAAACCGCG GCTCCTGAAC GGGGCGCCTG CCCCGAGTGC GGCGGCATCG TGGAGCACGA AGGCGGCTGC GCCGTCTGCC GGGTCTGCGG CTATTCCGAA TGCGCCTGA
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Protein sequence | MAETKTTVDI PGLSKNARTV LEKRYLKRDT DGRVLETPAD MFRRVAEAIA VADRNFDKKA DTKALAQKFY DLMTSFEFLP NSPTLMNAGR ELGQLSACFV LPVGDSMEEI FDAVKYTALI HKSGGGTGFS FSRLRPANDV VRSTSGISSG PISFMRVFDA ATETIKQGGT RRGANMGILR VDHPDIMDFI MCKDDQKHLN NFNISVGLTE AFMEAVERDA DYDLRNPRDG KPCGTLNARK VFSRIVKQAW KNGEPGIIFL DRLNKDNPTP HIGEIESTNP CGEQPLLPYE SCNLGSINLG KMVNNGDVDW KRLREVIRLG VHFLDNVIEV NNYPLPQIND MTRSNRKIGL GVMGWADMLI LLGIPYSSPE AISLGEKVMR FINDEGHAYS RELAAVRGAF PNFVGSTFDR PGEGPIRNAT VTTIAPTGTI SIIANASSGV EPLFAVSFVR QVLDKNILVE VNPIFEEIAR DQGFYSEELM QKIAQHGTVH DLAEIPEDIR KVFVTAHDIT PEDHIEMQAA FQKYTDNAVS KTVNFPNAAT IEEVEKVYRL AYKLECKGVT IYRDGSRDEQ VLSTGAKEEK EKVVQTEEKR AVKRDRPKAL KGWTYQMQTG CGPLYVTVNE DKAGLFELFT TMGKAGGCAS SQCEAIGRMV SLAWRSGVQA RQVIKQLLGI SCHLPAGFGD NKVLSCADAV ARAIQAHMQA AGYDVGLETA APERGACPEC GGIVEHEGGC AVCRVCGYSE CA
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