Gene Gmet_1297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1297 
Symbol 
ID3739466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1458039 
End bp1460267 
Gene Length2229 bp 
Protein Length742 aa 
Translation table11 
GC content64% 
IMG OID637778577 
Productribonucleotide-diphosphate reductase subunit alpha 
Protein accessionYP_384258 
Protein GI78222511 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0209] Ribonucleotide reductase, alpha subunit 
TIGRFAM ID[TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000197456 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.000842098 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGAAA CGAAGACGAC AGTGGATATC CCCGGCCTTT CGAAGAACGC CCGCACCGTG 
CTCGAGAAGC GATACCTCAA GCGAGACACT GACGGGAGAG TCCTCGAAAC TCCCGCCGAC
ATGTTCCGGC GCGTGGCCGA GGCCATTGCC GTTGCTGACC GTAATTTCGA CAAGAAGGCC
GACACCAAGG CCCTGGCCCA GAAGTTCTAC GACCTGATGA CCTCCTTCGA GTTCCTCCCC
AACTCCCCCA CCCTCATGAA CGCGGGGCGC GAGCTGGGCC AGCTCTCCGC CTGCTTCGTC
CTCCCTGTGG GGGACTCCAT GGAGGAGATC TTCGACGCGG TCAAGTACAC GGCCCTCATC
CACAAGTCCG GCGGCGGCAC CGGCTTTTCC TTCTCGCGGC TGCGTCCGGC CAACGACGTG
GTCCGTTCCA CCTCGGGCAT CTCCAGCGGC CCCATCTCGT TCATGCGGGT CTTCGACGCC
GCCACCGAAA CCATCAAGCA GGGGGGAACC CGGCGCGGCG CCAACATGGG GATCCTCCGC
GTGGATCATC CGGATATCAT GGACTTCATC ATGTGCAAGG ATGACCAGAA GCACCTCAAC
AACTTCAACA TCTCCGTGGG GCTCACCGAG GCCTTCATGG AGGCGGTGGA GAGGGACGCC
GATTACGATC TGCGCAACCC CCGTGACGGG AAGCCCTGCG GGACCCTCAA CGCCCGCAAG
GTCTTCAGCC GCATCGTGAA GCAGGCCTGG AAAAACGGCG AGCCGGGAAT CATCTTCCTG
GACCGCCTCA ACAAGGACAA CCCGACTCCC CACATCGGCG AGATCGAGTC CACCAACCCC
TGCGGCGAGC AGCCGCTCCT CCCCTACGAG TCATGCAACC TGGGCTCCAT CAACCTGGGG
AAGATGGTGA ATAACGGCGA CGTGGACTGG AAGCGCCTGC GGGAGGTCAT CCGCCTGGGA
GTCCACTTCC TGGACAACGT CATCGAGGTG AACAACTACC CCCTCCCCCA GATCAACGAC
ATGACCCGCT CCAACCGCAA GATCGGCCTC GGCGTCATGG GGTGGGCAGA CATGCTGATC
CTCCTGGGGA TCCCCTACAG CTCCCCGGAG GCCATCAGCC TCGGCGAGAA GGTGATGCGT
TTCATTAACG ACGAGGGGCA CGCCTATTCC CGCGAACTGG CCGCCGTGCG GGGAGCGTTC
CCGAACTTCG TGGGTTCCAC CTTTGACCGG CCGGGAGAAG GCCCCATCCG CAACGCCACG
GTGACCACCA TCGCCCCCAC CGGCACCATC TCCATCATTG CCAACGCATC CAGCGGTGTG
GAACCCCTCT TCGCAGTCTC CTTCGTGCGC CAGGTCCTCG ACAAGAACAT CCTCGTGGAG
GTAAACCCCA TTTTCGAGGA GATTGCCCGG GATCAGGGCT TCTATTCCGA GGAGCTCATG
CAGAAGATCG CCCAGCACGG CACCGTCCAC GACCTGGCCG AGATTCCCGA GGATATCCGC
AAGGTCTTCG TGACCGCCCA CGACATCACC CCGGAAGACC ACATCGAGAT GCAGGCCGCC
TTCCAGAAAT ACACCGACAA CGCCGTCTCC AAGACGGTCA ACTTCCCCAA CGCCGCCACC
ATCGAAGAGG TGGAGAAAGT CTACCGCCTG GCCTACAAAC TGGAGTGCAA GGGGGTCACC
ATCTACCGCG ACGGCTCCCG GGACGAGCAG GTCCTCTCCA CAGGCGCCAA GGAGGAAAAG
GAGAAAGTTG TCCAGACGGA GGAGAAACGG GCCGTGAAGC GGGACCGTCC CAAGGCCCTC
AAGGGATGGA CCTACCAGAT GCAGACCGGC TGCGGCCCAC TCTATGTCAC CGTCAACGAG
GACAAGGCCG GGCTTTTCGA GCTCTTCACC ACCATGGGGA AGGCGGGCGG GTGCGCCTCC
TCCCAGTGCG AGGCCATCGG CCGCATGGTG TCCCTCGCCT GGCGCAGCGG CGTCCAGGCC
CGGCAGGTGA TCAAGCAGCT TCTCGGCATC TCCTGCCACC TCCCCGCGGG CTTCGGCGAC
AACAAGGTTC TTTCCTGCGC CGACGCCGTG GCCAGGGCGA TCCAGGCCCA CATGCAGGCT
GCCGGCTACG ATGTGGGGCT CGAAACCGCG GCTCCTGAAC GGGGCGCCTG CCCCGAGTGC
GGCGGCATCG TGGAGCACGA AGGCGGCTGC GCCGTCTGCC GGGTCTGCGG CTATTCCGAA
TGCGCCTGA
 
Protein sequence
MAETKTTVDI PGLSKNARTV LEKRYLKRDT DGRVLETPAD MFRRVAEAIA VADRNFDKKA 
DTKALAQKFY DLMTSFEFLP NSPTLMNAGR ELGQLSACFV LPVGDSMEEI FDAVKYTALI
HKSGGGTGFS FSRLRPANDV VRSTSGISSG PISFMRVFDA ATETIKQGGT RRGANMGILR
VDHPDIMDFI MCKDDQKHLN NFNISVGLTE AFMEAVERDA DYDLRNPRDG KPCGTLNARK
VFSRIVKQAW KNGEPGIIFL DRLNKDNPTP HIGEIESTNP CGEQPLLPYE SCNLGSINLG
KMVNNGDVDW KRLREVIRLG VHFLDNVIEV NNYPLPQIND MTRSNRKIGL GVMGWADMLI
LLGIPYSSPE AISLGEKVMR FINDEGHAYS RELAAVRGAF PNFVGSTFDR PGEGPIRNAT
VTTIAPTGTI SIIANASSGV EPLFAVSFVR QVLDKNILVE VNPIFEEIAR DQGFYSEELM
QKIAQHGTVH DLAEIPEDIR KVFVTAHDIT PEDHIEMQAA FQKYTDNAVS KTVNFPNAAT
IEEVEKVYRL AYKLECKGVT IYRDGSRDEQ VLSTGAKEEK EKVVQTEEKR AVKRDRPKAL
KGWTYQMQTG CGPLYVTVNE DKAGLFELFT TMGKAGGCAS SQCEAIGRMV SLAWRSGVQA
RQVIKQLLGI SCHLPAGFGD NKVLSCADAV ARAIQAHMQA AGYDVGLETA APERGACPEC
GGIVEHEGGC AVCRVCGYSE CA