Gene Gmet_1295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1295 
Symbol 
ID3739156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1455763 
End bp1457601 
Gene Length1839 bp 
Protein Length612 aa 
Translation table11 
GC content62% 
IMG OID637778575 
Productpeptidase M3B, oligoendopeptidase-related clade 3 
Protein accessionYP_384256 
Protein GI78222509 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1164] Oligoendopeptidase F 
TIGRFAM ID[TIGR02290] oligoendopeptidase, pepF/M3 family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000104369 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.000569902 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGTAATCC AGAATGGGAG TGCAACGCAA CCGCCCATTT TCCCTGAAAG GATTGCCATG 
ACTACCGACA TCACCGCCAT GCTCTGGGAC ACCGATCCCC TCTACCATGC ACACGCACCG
GAACTCGAAG CCGATCTCGC CTCAGGAGCC GCCGAGACGA AAGCATTCCG GGTAGCCTAC
CTGGGGAAGG TCGCCTCCCT CGATGCAGCC GGACTTCTGG AAGCTCTCCG GCGTTACGAG
GCCCTCACGG AGCTTCTTGT GAAACCCCAG CTTTACGCCC ATCTCCTCTT CGCTGCCGAC
GCCGGGAACG ACGAGCACAA GAAGCTCTCC CAACGGACTG CCGAGTTCGG CAACCTCATG
GGGCGTGAGC TCCTCTTCTT CGATCTGGAG ATCATGGAGA TCCCCGACGG GGGTTTCGCG
GAGATTGTCG CGGACGGTGG CTTGGCCGGC TACCGCCACT ACCTGGAGAG CGTGCGCAAA
TTCAAGCCCC ACACCCTCAC GGAGCGGGAG GAGCAGCTCC TGAAGCTGAA GAACCTCACG
GGGGCCGAGG CCTTCACCCG GCTCTTTGAC GAGCTGTCGG CATCCTTCCG CTACCGGATG
GAACTGGACG GGGAAGAACG GGAATTCACC GGCGAGGAGC TCCTGGGGCT CCTCCATCAT
CCAGACGCAA CAGTGCGGGA GCGGGCCTTC GCCATCTTCC TCAGGCGCCA CGAGGAGGAG
GGGATCGCCC TCGGTGCCAT CTTCAACACC GTGGCTCTCG ACCACGGCCA GGAATTGGAG
CTCCGCAGCT ACCGCCACCC CATGGAGCCC ACCAACCTGG GGAACGAAAT CCCCGAAGAA
GTGGTGAATC GTCTCATGGA TGTCTCTGAG GCCAACTACG GCCTGGCCCG GGACTATTTC
CGCCTCAAGG CGCGGCTCCT GGGGCTTCCG AAGCTCAAAA ATACTGATGT CTACGCCCCG
GCTGGCGAAA CGGACCGCCA TTACACCTTC GAGGAGGCCC GGGACTTGGT CCTGGAGGCC
TATGGTGCCT TCCAGCCCCG CTTCCGCGAC ATCTGCGCCG CCTTTTTCGC CGAGCGGCGT
ATTGACGTGC TGCCACGCCC CGGCAAGGGA GGAGGCGCGT TCTGCATGGG GATGACGCCG
AGCCTCTCCC CGTATGTGCT CCTGAACTTC ACCGGCAACC TGCGCGACGT GGCGACCCTG
GCCCACGAAC TGGGGCACGG GCTCCACTTC GTCCTGGCCC AGAAGCAGAC CATGCTCAAC
TACCACGCAC CGCTTCCTCT GGCGGAAACG GCGTCGGTCT TTGGCGAGAT GCTCCTGACC
CGGTTCCTTC TTGAACGGGA ATCCGACCCG CAAGTGAAGA TCGCCCTTCT CTGCGCCAAG
ATCGAGGATA TCATCGCCAC CACCTTCCGC CAGAACGTCC TCACCCGCTT CGAGGAACGG
ATGCACAAGG AGCGGAAGGA GGGGCTCCTG ACCTCATCAC GGCTCTGTGA CCTCTGGTGG
GAGGAGAACG GCAAGCTCTA CGGCGACGCC GTGGAGATGA TCGAGCCCTA CCGCTGGGGG
TGGAGCTACA TCTCCCACTT CATCCATGCC CGCTTCTACT GCTACTCCTA CACTTTCGCG
GAGCTTCTGG TCCTTTCCCT CTACCGCAAA TACCTGGAGG ACGGCGAAAC GTTCATCCCC
ACCTATGTGG GAATCCTGGA AAGCGGCGGC TCCCTGTCGC CGGCAGACAC GGTGAAGCCC
GCGGGAATCG ACCTGGCCGA TCCCCACTTC TGGCAGAAGG GGTATGATTT TCTGGCGGAG
CTGATCGAAG AGTTGAAGGG ATTGGTGGCG AAACAGTAA
 
Protein sequence
MVIQNGSATQ PPIFPERIAM TTDITAMLWD TDPLYHAHAP ELEADLASGA AETKAFRVAY 
LGKVASLDAA GLLEALRRYE ALTELLVKPQ LYAHLLFAAD AGNDEHKKLS QRTAEFGNLM
GRELLFFDLE IMEIPDGGFA EIVADGGLAG YRHYLESVRK FKPHTLTERE EQLLKLKNLT
GAEAFTRLFD ELSASFRYRM ELDGEEREFT GEELLGLLHH PDATVRERAF AIFLRRHEEE
GIALGAIFNT VALDHGQELE LRSYRHPMEP TNLGNEIPEE VVNRLMDVSE ANYGLARDYF
RLKARLLGLP KLKNTDVYAP AGETDRHYTF EEARDLVLEA YGAFQPRFRD ICAAFFAERR
IDVLPRPGKG GGAFCMGMTP SLSPYVLLNF TGNLRDVATL AHELGHGLHF VLAQKQTMLN
YHAPLPLAET ASVFGEMLLT RFLLERESDP QVKIALLCAK IEDIIATTFR QNVLTRFEER
MHKERKEGLL TSSRLCDLWW EENGKLYGDA VEMIEPYRWG WSYISHFIHA RFYCYSYTFA
ELLVLSLYRK YLEDGETFIP TYVGILESGG SLSPADTVKP AGIDLADPHF WQKGYDFLAE
LIEELKGLVA KQ