Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1295 |
Symbol | |
ID | 3739156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 1455763 |
End bp | 1457601 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637778575 |
Product | peptidase M3B, oligoendopeptidase-related clade 3 |
Protein accession | YP_384256 |
Protein GI | 78222509 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1164] Oligoendopeptidase F |
TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000104369 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.000569902 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGTAATCC AGAATGGGAG TGCAACGCAA CCGCCCATTT TCCCTGAAAG GATTGCCATG ACTACCGACA TCACCGCCAT GCTCTGGGAC ACCGATCCCC TCTACCATGC ACACGCACCG GAACTCGAAG CCGATCTCGC CTCAGGAGCC GCCGAGACGA AAGCATTCCG GGTAGCCTAC CTGGGGAAGG TCGCCTCCCT CGATGCAGCC GGACTTCTGG AAGCTCTCCG GCGTTACGAG GCCCTCACGG AGCTTCTTGT GAAACCCCAG CTTTACGCCC ATCTCCTCTT CGCTGCCGAC GCCGGGAACG ACGAGCACAA GAAGCTCTCC CAACGGACTG CCGAGTTCGG CAACCTCATG GGGCGTGAGC TCCTCTTCTT CGATCTGGAG ATCATGGAGA TCCCCGACGG GGGTTTCGCG GAGATTGTCG CGGACGGTGG CTTGGCCGGC TACCGCCACT ACCTGGAGAG CGTGCGCAAA TTCAAGCCCC ACACCCTCAC GGAGCGGGAG GAGCAGCTCC TGAAGCTGAA GAACCTCACG GGGGCCGAGG CCTTCACCCG GCTCTTTGAC GAGCTGTCGG CATCCTTCCG CTACCGGATG GAACTGGACG GGGAAGAACG GGAATTCACC GGCGAGGAGC TCCTGGGGCT CCTCCATCAT CCAGACGCAA CAGTGCGGGA GCGGGCCTTC GCCATCTTCC TCAGGCGCCA CGAGGAGGAG GGGATCGCCC TCGGTGCCAT CTTCAACACC GTGGCTCTCG ACCACGGCCA GGAATTGGAG CTCCGCAGCT ACCGCCACCC CATGGAGCCC ACCAACCTGG GGAACGAAAT CCCCGAAGAA GTGGTGAATC GTCTCATGGA TGTCTCTGAG GCCAACTACG GCCTGGCCCG GGACTATTTC CGCCTCAAGG CGCGGCTCCT GGGGCTTCCG AAGCTCAAAA ATACTGATGT CTACGCCCCG GCTGGCGAAA CGGACCGCCA TTACACCTTC GAGGAGGCCC GGGACTTGGT CCTGGAGGCC TATGGTGCCT TCCAGCCCCG CTTCCGCGAC ATCTGCGCCG CCTTTTTCGC CGAGCGGCGT ATTGACGTGC TGCCACGCCC CGGCAAGGGA GGAGGCGCGT TCTGCATGGG GATGACGCCG AGCCTCTCCC CGTATGTGCT CCTGAACTTC ACCGGCAACC TGCGCGACGT GGCGACCCTG GCCCACGAAC TGGGGCACGG GCTCCACTTC GTCCTGGCCC AGAAGCAGAC CATGCTCAAC TACCACGCAC CGCTTCCTCT GGCGGAAACG GCGTCGGTCT TTGGCGAGAT GCTCCTGACC CGGTTCCTTC TTGAACGGGA ATCCGACCCG CAAGTGAAGA TCGCCCTTCT CTGCGCCAAG ATCGAGGATA TCATCGCCAC CACCTTCCGC CAGAACGTCC TCACCCGCTT CGAGGAACGG ATGCACAAGG AGCGGAAGGA GGGGCTCCTG ACCTCATCAC GGCTCTGTGA CCTCTGGTGG GAGGAGAACG GCAAGCTCTA CGGCGACGCC GTGGAGATGA TCGAGCCCTA CCGCTGGGGG TGGAGCTACA TCTCCCACTT CATCCATGCC CGCTTCTACT GCTACTCCTA CACTTTCGCG GAGCTTCTGG TCCTTTCCCT CTACCGCAAA TACCTGGAGG ACGGCGAAAC GTTCATCCCC ACCTATGTGG GAATCCTGGA AAGCGGCGGC TCCCTGTCGC CGGCAGACAC GGTGAAGCCC GCGGGAATCG ACCTGGCCGA TCCCCACTTC TGGCAGAAGG GGTATGATTT TCTGGCGGAG CTGATCGAAG AGTTGAAGGG ATTGGTGGCG AAACAGTAA
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Protein sequence | MVIQNGSATQ PPIFPERIAM TTDITAMLWD TDPLYHAHAP ELEADLASGA AETKAFRVAY LGKVASLDAA GLLEALRRYE ALTELLVKPQ LYAHLLFAAD AGNDEHKKLS QRTAEFGNLM GRELLFFDLE IMEIPDGGFA EIVADGGLAG YRHYLESVRK FKPHTLTERE EQLLKLKNLT GAEAFTRLFD ELSASFRYRM ELDGEEREFT GEELLGLLHH PDATVRERAF AIFLRRHEEE GIALGAIFNT VALDHGQELE LRSYRHPMEP TNLGNEIPEE VVNRLMDVSE ANYGLARDYF RLKARLLGLP KLKNTDVYAP AGETDRHYTF EEARDLVLEA YGAFQPRFRD ICAAFFAERR IDVLPRPGKG GGAFCMGMTP SLSPYVLLNF TGNLRDVATL AHELGHGLHF VLAQKQTMLN YHAPLPLAET ASVFGEMLLT RFLLERESDP QVKIALLCAK IEDIIATTFR QNVLTRFEER MHKERKEGLL TSSRLCDLWW EENGKLYGDA VEMIEPYRWG WSYISHFIHA RFYCYSYTFA ELLVLSLYRK YLEDGETFIP TYVGILESGG SLSPADTVKP AGIDLADPHF WQKGYDFLAE LIEELKGLVA KQ
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