Gene Gmet_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1287 
Symbol 
ID3739148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand+ 
Start bp1447409 
End bp1447801 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content59% 
IMG OID637778567 
ProductPTS system fructose subfamily IIA component 
Protein accessionYP_384248 
Protein GI78222501 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID[TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.178169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00000226517 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTGGAT TGGTGCTCGT TACCCATGCC GGCCTTGCTG AGGAACTCCT CAGGGGGGCC 
GAGATGATCG TAGGACCCAT TGAGTCCGCC GAAACCATCG GAATCCGGCC GGGAGATCAG 
GCTGATGCGA TCATGGAGCG CATTGCAGAG GCCGTGAAAC GTGTTTCCGT GGACGGTGCG 
CTTATCATGA CGGACATGTT TGGCGGGACG CCGTCGAATA TGAGTCTTTC CTTCCTCGAG 
GCCGACCGCA TCGAGGTGTT GACCGGCGTG AATCTGCCGA TGGTCATCAA GTTTGCTGCC 
GAGCGGGACC GGATAGCTGT TGCCGAACTG GCCACGTCCC TCAAGGAGTG CGGCCGCGAG 
AGTATCGCCG TGGCCGGAGA TTATCTGAAA TAA
 
Protein sequence
MIGLVLVTHA GLAEELLRGA EMIVGPIESA ETIGIRPGDQ ADAIMERIAE AVKRVSVDGA 
LIMTDMFGGT PSNMSLSFLE ADRIEVLTGV NLPMVIKFAA ERDRIAVAEL ATSLKECGRE 
SIAVAGDYLK