| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1282 |
|---|
| Symbol | |
|---|
| ID | 3739143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1442550 |
|---|
| End bp | 1443290 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637778562 |
|---|
| Product | ABC transporter-related protein |
|---|
| Protein accession | YP_384243 |
|---|
| Protein GI | 78222496 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.000000182009 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCCA ACAGCGCTGA TATGGTTTTG CAGGCGCATG GCCTCCGGAA GGGATTCGGC
AAGCGTGTCG TCGTGAATGG GGTTGACCTG CGGGTTGCCA CCGGCGAGGT GGTGGGGCTG
CTGGGACCCA ACGGCGCTGG AAAGACCACC ACGTTTTACA TGGTTGTGGG GCTCTGCCGA
CCGGATGGGG GGCAGGTCTT TATCGGCGAC GAAGAGATTA CTGCTCTTCC CATGTATCAG
CGTGCGCGCA TGGGGATCAG CTATCTCCCT CAAGAACCAT CAGTTTTCCG TAAACTTACG
GTGGAAGAAA ACATACTGGC CGTGCTGGAG ACTATGGATC TTTCGTCATC TGAACGGCGT
GATCGAGCTG CGGAGCTTAT CGGCGAGTTC AAGATTGATC ATATAGCAAA AAGCAAGGGA
TACGCCCTCT CCGGTGGGGA GCGTCGGCGG GTCGAGATAG CACGGGCACT GGCCACGGAT
CCCCTTTTCA TCCTTCTTGA CGAACCTTTT GCCGGCATCG ATCCCATTGC GGTGATCGAT
ATTCAGGGGA TCATTACTGA ATTGAAGGCG CGTGGAATAG GGATATTGAT CTCTGACCAC
AACGTGAGGG AGACCCTCGG TGTATGCGAT AACGCCTACA TCATGAGCGC CGGCGAAGTG
ATAGAGTATG GCGATCCGGT CAAAATTGCC GGAAGCAAGC AGGCCCGGGA GATTTATCTG
GGAGAAAAAT TCAGGCTTTA A
|
|---|
| Protein sequence | MAANSADMVL QAHGLRKGFG KRVVVNGVDL RVATGEVVGL LGPNGAGKTT TFYMVVGLCR
PDGGQVFIGD EEITALPMYQ RARMGISYLP QEPSVFRKLT VEENILAVLE TMDLSSSERR
DRAAELIGEF KIDHIAKSKG YALSGGERRR VEIARALATD PLFILLDEPF AGIDPIAVID
IQGIITELKA RGIGILISDH NVRETLGVCD NAYIMSAGEV IEYGDPVKIA GSKQAREIYL
GEKFRL
|
|---|
| |