| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1266 |
|---|
| Symbol | |
|---|
| ID | 3739765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 1427204 |
|---|
| End bp | 1427404 |
|---|
| Gene Length | 201 bp |
|---|
| Protein Length | 66 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637778546 |
|---|
| Product | cold-shock DNA-binding protein family protein |
|---|
| Protein accession | YP_384227 |
|---|
| Protein GI | 78222480 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1278] Cold shock proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 2.7573e-18 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00000000000100442 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAGG GCAAGGTTAA GTGGTTCAAC GACGCCAAAG GTTTCGGCTT CATTGAGCAG
GAGAACGGGG AGGACGTGTT TGTTCACTTC TCAGCCATCC AGTCCGACGG GTTCAAGACC
CTTGCTGAAG GCGAAGCTGT CACCTTCGAT GTGGTCACCG GTCCCAAGGG ACTCCAAGCA
GCCAACGTAA AAAAAGCTTA A
|
|---|
| Protein sequence | MAQGKVKWFN DAKGFGFIEQ ENGEDVFVHF SAIQSDGFKT LAEGEAVTFD VVTGPKGLQA
ANVKKA
|
|---|
| |