Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1265 |
Symbol | |
ID | 3739764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1425537 |
End bp | 1427075 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637778545 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_384226 |
Protein GI | 78222479 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000029461 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00000000000565514 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCGGAAC TGAAGACCAT CAAGATTTTC GATACAACGC TTCGCGACGG TGAGCAGTCG CCGGGCAACA GCATGAACAT CGATGAGAAA CTGCGCGTTG CCAAGCAGCT TCTGAAGCTG AACGTCGATG TCATCGAAGC GGGATTTCCC ATCGCTTCCG AGGGGGATTT CGAGGCGGTC AAACGGGTTG CCCAGACCAT CAAGGGACCG GAGATCGCTG GCCTTTGCCG TTCCAGCGAC AAGGATATCG ACCGGGCCTG GGAGGCACTT AAGTACGCAG GTGAGAAGGG GCGTATCCAT ACTTTTATCG CCACCTCTGA TATCCACATG AAGTACAAGC TGAAGATGAC TCGTGAGCAG GTGCTTGAGA ATGCGGTCAA AGCGGTGAAG CGAGCGAAAT CCTACACGCC AAATGTGGAA TTTTCCTGCG AGGATGCCGT CCGTACCGAC CTGGCCTTCT TGGTGCAAAT GGTGGAGGCG GTAATCGACG CCGGAGTCAC GACGGTGAAT ATTCCCGATA CTGTCGGCTA CACGATCCCC TTCGAGTACT TCAACATCAT CCGTCACCTC AAGGAAAACG TTTCCAATAT TGAAAAGGCG GTCATTTCGG TCCATTGCCA CAATGACCTG GGGCTTTCCG TGGCGAACTC CATTGCAGCG GTTCAGGCTG GGGCAGGTCA GGTGGAGTGT ACCATCAACG GTATTGGTGA GCGGGCGGGA AACTGCTCCC TTGAAGAGTT CGTCATGGCT ATCAAGACCC GCCACGACAT CCTTCCCTTC AGGACGAACG TTGACCACGA ACAGATCGTC CCTGCCAGTC GGCTTCTCTC CACTATTACC GGCATCGGAG TTCAGCCCAA CAAGGCGATT GTAGGGGCCA ACGCCTTTGC CCATGAGTCG GGCATACATC AGCATGGCGT GCTCATGGAG AAATCGACCT ACGAAATCAT GACTCCGGAA TCAATCGGGC TCAAGACGAA CGTTTTGGTG CTCGGCAAGC ATTCGGGACG TCACGCATTC AAGAAGCGGC TTGCGGAACT TGGGTACGAG CTTTCCGATG AAGACCTGAA CCGCGCCTTT GAGCGTTTCA AGGCCTTGGC TGATCTGAAG AAAGAGGTTT TCGACGAGGA TCTTGACGCA TTGGTTGCAG ACGAAGTGAT GCGTCCGGCG GAGAAGTTCC GGCTCTCTCA TATCACGGTC ACGTGCGGTT CCTTTGCGGT CGCCACTTCG ACGGTGCAAA TGGAGATTGA CGGTACGGCG GTGCGAACTG CCGAACTGGG GGATGGCCCG GTTGATGCGA CTCTCAAGGC AATCAAGAAG CTGACCAAGA CCAAGGCGAA GCTTCAGCAG TATAATGTCG GATCCATTAC CGGCGGGACC GATGCCCAAG GCGAAGTGAC CGTGCGGGTG ACAGACGGCA ACGAAACGGT TGTGGGGCGA GGTTCTTCCA CAGACATAAT TGAGGCGTCG GCAAAGGCTT ATATCAACGC GCTCAATCGA CTCAATGCAA AGATAGAGCG AATCCACGAA AGTCTGTGA
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Protein sequence | MAELKTIKIF DTTLRDGEQS PGNSMNIDEK LRVAKQLLKL NVDVIEAGFP IASEGDFEAV KRVAQTIKGP EIAGLCRSSD KDIDRAWEAL KYAGEKGRIH TFIATSDIHM KYKLKMTREQ VLENAVKAVK RAKSYTPNVE FSCEDAVRTD LAFLVQMVEA VIDAGVTTVN IPDTVGYTIP FEYFNIIRHL KENVSNIEKA VISVHCHNDL GLSVANSIAA VQAGAGQVEC TINGIGERAG NCSLEEFVMA IKTRHDILPF RTNVDHEQIV PASRLLSTIT GIGVQPNKAI VGANAFAHES GIHQHGVLME KSTYEIMTPE SIGLKTNVLV LGKHSGRHAF KKRLAELGYE LSDEDLNRAF ERFKALADLK KEVFDEDLDA LVADEVMRPA EKFRLSHITV TCGSFAVATS TVQMEIDGTA VRTAELGDGP VDATLKAIKK LTKTKAKLQQ YNVGSITGGT DAQGEVTVRV TDGNETVVGR GSSTDIIEAS AKAYINALNR LNAKIERIHE SL
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