Gene Gmet_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1253 
Symbolfrr 
ID3738796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1413013 
End bp1413570 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content54% 
IMG OID637778533 
Productribosome recycling factor 
Protein accessionYP_384214 
Protein GI78222467 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.000298645 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.00105804 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGAAAG AAGTCATTGC CGACATGAAG GCGCACATGG AAAAGTCGGT TGACGCACTT 
CGCCGCGAAT ACCAGAAGGT GCGCACCGGC AGGGCCACCA CCGGGCTTCT CGATGATATC
AAGGTTGAAT ACTACGGGAA TCCTTCGCCC CTCAGTCAGG TGGCGACCCT TTCTGTCCCC
GAGCCCCGGA CGATAACCAT CCAACCTTGG GAGGCCAAGT TGATCCCGGT TATCGAAAAG
GCGATCATGA ACGCGAATCT TGGTTTTACC CCGGCCAATG ACGGTAAGAC GATCCGCATT
TCCCTTCCGC CTCTCACCGA AGAGCGCCGG AAGGAAATCG TCAAAACACT CAAGAAAATG
GCTGAGGATA CCAAGGTTGC GGTTCGCAAC ATTCGCCGTG ACGGGATTGA TAGCCTCAAA
AAGCTGGAGA AGGATAAGAA GATTTCCGAA GACGATCTGA AGCGCGCCGA GAAGGAAGTG
CAGGATGTCA CGAACACGTT CGTGGCAAAG GTTGAGGAAG TGCTTACGCA CAAGGAGAAA
GAGGTTCTGG AGGTCTGA
 
Protein sequence
MTKEVIADMK AHMEKSVDAL RREYQKVRTG RATTGLLDDI KVEYYGNPSP LSQVATLSVP 
EPRTITIQPW EAKLIPVIEK AIMNANLGFT PANDGKTIRI SLPPLTEERR KEIVKTLKKM
AEDTKVAVRN IRRDGIDSLK KLEKDKKISE DDLKRAEKEV QDVTNTFVAK VEEVLTHKEK
EVLEV