| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1244 |
|---|
| Symbol | |
|---|
| ID | 3738787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 1402188 |
|---|
| End bp | 1403198 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637778524 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_384205 |
|---|
| Protein GI | 78222458 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2984] ABC-type uncharacterized transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.0648578 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAATC GTCGACAAGA CCATAGTTCG ATCCAGAGCA CCAGGGCTTT CGGCAAAGAT
CACACGATCC CGCCATTCCT GGGCGCAAGC GACGTGAACA GAGCCATCCT CTTCATGAGG
CTTGTCACGT TCGTGTTTGC GTTCACTCTG GTGCTCCTTG GCGGAACAAG TCAGGCGGCC
CAGAAGGTGC TCGTCCTGCA AAGCCTCAGG GTCGCCCCCT ATGAGGAAGC GGCGAAGGGG
GTGCGAAGCG TCGTGGCCGG GAACTTCAGG AAACTGGTCC TGTCTGATCT CGACGGTCTC
GATGTGGCAA AAGCGGTTCG GGATGAACGG CCCGATGTGA TTGTGGCCAT CGGCACGGAG
GCCATGAACA GGGTAAAGAG AATCAAGGAC ACTCCCATCG TCTACCTTAT GGTCTTCGAC
CAGCATAACT CCCTCACTAC TGGATCAAAC ATCACCGGCA TCGGCATGCA CGTGGCGCCG
GAGCGGCAAT TAGTTTCAGC ACAGAAGGTA ATGCCGCGGC TCAAGCGTGT GGGGACCCTG
TACAACCCGG CGCGAAGCGG AGCCCTTTTC CGTAAATCGC AGGCAACGGC CCGCTCTCTC
GGCATAGACC TCGTGGCGCG GGAAGTCCGC TCGTCACGCG ATGTCCTGAA TCTTGTCGAA
GGGATGAAAG GCGACATCGA GGCATTCCTC ATGCTTCCCG ATGCCACGCT TTTGACACCG
GAAGCGATCG AGTACCTCCT GCTCTTCTCC CTGAACAACA GGATTCCCAT CATCACGTTT
TCGGATAAGT ATGTTCAGAT GGGAGCACTC ATGGCGCTCG ATGTTGATCC GTACGAGGTG
GGGCGGCAGG CCGGCGAAAT GGTCAGAAAG ATACAGTCGG GAACCTCTCC TGAAAGCATC
CCGCGCAGCG AACCCCATGG CGCGGTCATC ACGATAAACA GCAGGATAGC GCGCAAACTT
GGCCTCTCCT TGAACGAAGA GGCTTTAAGT CGAGCCAAAG TCATACGCTA G
|
|---|
| Protein sequence | MSNRRQDHSS IQSTRAFGKD HTIPPFLGAS DVNRAILFMR LVTFVFAFTL VLLGGTSQAA
QKVLVLQSLR VAPYEEAAKG VRSVVAGNFR KLVLSDLDGL DVAKAVRDER PDVIVAIGTE
AMNRVKRIKD TPIVYLMVFD QHNSLTTGSN ITGIGMHVAP ERQLVSAQKV MPRLKRVGTL
YNPARSGALF RKSQATARSL GIDLVAREVR SSRDVLNLVE GMKGDIEAFL MLPDATLLTP
EAIEYLLLFS LNNRIPIITF SDKYVQMGAL MALDVDPYEV GRQAGEMVRK IQSGTSPESI
PRSEPHGAVI TINSRIARKL GLSLNEEALS RAKVIR
|
|---|
| |