| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1240 |
|---|
| Symbol | |
|---|
| ID | 3738783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1398085 |
|---|
| End bp | 1399056 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637778520 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_384201 |
|---|
| Protein GI | 78222454 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1456] CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.898012 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.0596193 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGATTG TTTCGACGGA GTTCCGGTTT GCCGACCGGC TCGGTGCCTG GAAGGCCCGG
TGGGGGATCG GGCGGATGTC GTACCTGGTG CCACCGGGCC TCTACGCCAT TGGCTCCCCC
GGCCCCGAAG ACCCCGTGGT GGTGACCGCC AACTACAAGA TGAGCTACGA CCTGGTCAGG
AGGGAGCTTT CGGGGCGCAA CGTCTGGTTC CTCGTCCTCG AAACCTTCGG GATCAATGTC
TGGTGCGCTG CCGGCAAGGG AACCTTCGGC ACCGACGAAC TGGTCCGTCG CGTGGGAATG
GTCAAACTTG CCACGGTGGT GAAACACCGG GCGCTCATTC TCCCCATTCT CGGCGCTCCC
GGCGTGGCCG CCCACCAGGT TGCCCGGCGG AGCGGATTCC GGGTGCACTA CGCCACGATC
CGCGCCGCCG ACCTCCCCGA GTACCTCGAT AACGGCATGG TGACTACACC TGAGATGCGT
CAGCTTACCT TTACCACCCG TGAGCGGCTC GCCCTCACCC CAATCGAACT GGTGACGACC
GGGAAGTGGG TCGTGCCGTT CGTGGCGCTA CTCGTCGTTC TGTCGATCGT TCCCGGCGGG
CTTTTATCCT CCCCAACCCT TGTCTCTTCG TTGGTTCTCT TCGTGGGGAC CGTGCTGGCC
GGAGCCGTTG CTGCTCCGGT ACTTCTTCCC TGGCTTCCGG GTAAAAGTTT TGCCGTGAAG
GGGGCAGTGG CCGGTTGCTG CTGGGCAGTT CTGTTTATTG GGGTAGGGAG GGGGGCAACG
GGATGGCTTG ACGCCATGGC CCTCTTTCTC ACCGTGCCGG CCGTGACCGC CTTCCTGACC
CTTAATTTCA CCGGCAGCAC CCCCTTCACC TCCCGCTCAG GGGTGAAGAA GGAGATGCGG
CTTGGGCTGC CGATGATGGC AGTGTCACTG CTTGCCGGCA TTTCCCTCTG GATCGCGGCC
CGTTTCTTCT GA
|
|---|
| Protein sequence | MPIVSTEFRF ADRLGAWKAR WGIGRMSYLV PPGLYAIGSP GPEDPVVVTA NYKMSYDLVR
RELSGRNVWF LVLETFGINV WCAAGKGTFG TDELVRRVGM VKLATVVKHR ALILPILGAP
GVAAHQVARR SGFRVHYATI RAADLPEYLD NGMVTTPEMR QLTFTTRERL ALTPIELVTT
GKWVVPFVAL LVVLSIVPGG LLSSPTLVSS LVLFVGTVLA GAVAAPVLLP WLPGKSFAVK
GAVAGCCWAV LFIGVGRGAT GWLDAMALFL TVPAVTAFLT LNFTGSTPFT SRSGVKKEMR
LGLPMMAVSL LAGISLWIAA RFF
|
|---|
| |