| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1233 |
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| Symbol | |
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| ID | 3738410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1390389 |
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| End bp | 1392110 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637778513 |
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| Product | intermediate filament protein |
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| Protein accession | YP_384194 |
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| Protein GI | 78222447 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.190296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC GTATTGTCGT GGCATTATTC CTGGCTCTTT CCTTTCTTCC GGGATGCGCC
ACAAACGGCG CGGGAAAGCC TCTTCCTGCC AACGAGCATT CATTTCAGCC GACCGTCAAT
ATTGCCGGAT CCAGGGCTCT CTACATTTAT TCATTGTCGC GTCTCCGCGA GCTGGACGGG
GATTTCGAGG GTGCGCTCAC GCTCCTGAAT GGTGCCATTG AGGCTGACCC CAACTCCGCG
TTTCTTCATA CGGCAGCCGC CGAGATCTAT CTGAAATCGG GCAAACTCGA CGATGCGCTC
CGTGCATGTG AAAACGCCAT CCGCGTCGAT CCCGGGTTCC GTCCGGCACG GATCATTGCC
GGGACCATCC TGGCAAACCT CAAGCGGGAC AAGGAAGCTA TTGTCCATCT CAGCAAGGCC
ATTGAGCTTG ATCCGACCAA GGAGGATGCC TATCTCCACC TGGCCATCTC CTATGTCCGA
ACCTTCGATT ACGAGCAGGC GGTTAACACC CTCAAGTCCC TGATCAAGAT CAACCCCGAG
TCATCGCTGG GCTACTATTA CCTGGGCAAG ACCTACGACC AGATGAAGCT CCAGAAGGAG
GCTGCCAACT ATTACAAGAA GGCCATCGAG ATCAAGCCCG ATTTCGAGCA GGCCATAATC
GACCTGGGGA TTTCCCAGGA GGGGCTCGGC CTCTATGATG ATGCCATCGC CACCTACAAG
CGGCTGCTTG AGACAAATCC GTTCAACATG AACGTGCTGC AGCACCTGGT GCAGCTTTAC
CTCCAGCAGC AGCGGCTGGA GGACGCGCTC CCACTGCTCA TCGTGATGAA GGATCGGGGT
GTCGGCGGCC TGGAAACCCA GCGCAAGATC GGCCTCATCT ATATGGAACT GGAGCGCTAT
GACGAGGCAA TCGCCGAATT CGAGCAGATC CTTGCCCGGG AACCCAAGGC CCACCAGATT
CGCTTCTACA TTGCGAGCGC TTACGAGGAG AAAGAGGAGT TCGACAAGGC CATAGAGGAA
TTCAGTAAGA TTCCTCCGGG AACCGCCAAT TACGTTGAGG CCTTGGGGCA CATCGCTTTC
ATGTACCGGG ATCAGGAAAA ACCTGAGAAG GGAATCCAGA TCCTGACGGA TGCCATTACT
GCCAATCCCG ATAAATTGGA CCTCTATCTC TATCTGGCCG GTCTGTACGA ATCAATGGAT
AAGTTCTCAG AAGGACTTGC CGTTCTCAAG GGGGTTGAAG GGAAATTTGC CGAGGACCCG
AGGCTCCACT TCCGGATGGG AACCATCCTC GACAAAATGG GGAACAAGGA GGAGTCCATC
GCCCGGATGA AGCGGGTTAT CGCCATTACG CCCGACGATG CCCAGGCCCT CAACTATCTG
GGCTATACCT ACGCCGAGAT GGGCATCAAG CTGGATGAAG CCCTCCAGTA CCTCAAGAAG
GCCGTGGCGC TTCGTCCCAA CGACGGTTTT ATTCTCGACA GTCTCGGCTG GGTCTACTTC
AAGATGAAGC GTTATGACGA GGCCGTGCCG CTCCTGGAGC GGTCGCTCAA GGTCGTGGAG
GACGATCTGA CGGTCATGGA GCACCTGGCC GACGCCTATG CAGCCAACCA TGAATACCGC
AATGCCTTGA AACTTTACAA AAAGATCCTC GACGCCGACC CGGGTCGCAA GGATATCGCC
GAAAAGAAGA AAAAGGTCAG GGCGGAAAGT CTGGAAAAAT GA
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| Protein sequence | MKKRIVVALF LALSFLPGCA TNGAGKPLPA NEHSFQPTVN IAGSRALYIY SLSRLRELDG
DFEGALTLLN GAIEADPNSA FLHTAAAEIY LKSGKLDDAL RACENAIRVD PGFRPARIIA
GTILANLKRD KEAIVHLSKA IELDPTKEDA YLHLAISYVR TFDYEQAVNT LKSLIKINPE
SSLGYYYLGK TYDQMKLQKE AANYYKKAIE IKPDFEQAII DLGISQEGLG LYDDAIATYK
RLLETNPFNM NVLQHLVQLY LQQQRLEDAL PLLIVMKDRG VGGLETQRKI GLIYMELERY
DEAIAEFEQI LAREPKAHQI RFYIASAYEE KEEFDKAIEE FSKIPPGTAN YVEALGHIAF
MYRDQEKPEK GIQILTDAIT ANPDKLDLYL YLAGLYESMD KFSEGLAVLK GVEGKFAEDP
RLHFRMGTIL DKMGNKEESI ARMKRVIAIT PDDAQALNYL GYTYAEMGIK LDEALQYLKK
AVALRPNDGF ILDSLGWVYF KMKRYDEAVP LLERSLKVVE DDLTVMEHLA DAYAANHEYR
NALKLYKKIL DADPGRKDIA EKKKKVRAES LEK
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