Gene Gmet_1230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1230 
Symbol 
ID3738407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1384969 
End bp1388271 
Gene Length3303 bp 
Protein Length1100 aa 
Translation table11 
GC content59% 
IMG OID637778510 
Productserine phosphatase 
Protein accessionYP_384191 
Protein GI78222444 
COG category[E] Amino acid transport and metabolism
[K] Transcription
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0591] Na+/proline symporter
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.081901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCCTGA GCATTGAACT GGTGGTCGGA GTATCGCTCC TCTACATCGT CCTGCTCTTC 
GGGGTTGCGT ACTATGCCGA CAGAAAGCGG GAAGAGGGAA AGAGCATTAT CGCCAACCCC
TATGTCTACG CTCTCTCCAT CGCCGTGTAC CACACCTCGT GGACGTTCTA CGGCAGCGTC
GGCAAGGCGG CCACCACCGG CCTCGACTTT CTTCTCGTCT ATCTGGGTCC CACCCTCATG
GCATTCACCT GGTGGTTTCT CCTGCGCAAG ATCGTCCGGA TCAGCAAGGA GAACAACATC
ACCTCCATCG CCGACTTCAT CAGTTCCCGC TACGGCAAAT CCCAATGGCT CGGGGCCGTC
ATCACCATCA TCGCCATCTT CGGAGTAATG CCCTACATCG CCCTTCAGCT CAAGGCGGTG
TCCAGCACCT TTGACATCAT CTGCGGCTAC CCCTACATCC AGCTCCCGCT GCTCCACAAA
AACTACCCCT TCTCGCTGCA CACCAACTTC TTCGCAGCTC TCATCCTGAG CATCTTCAGC
ATGATCTTCG GCGCCCGGCG CCAGAATTCC TCGGAACGAC GCCACGAGGG TCTCGTGGCC
GCAGTTGCCG TGGAGTCGGT CGTCAAACTG GCTTCATTCC TCGCCGTCGG CACGTTCATC
ACCTACGGGC TCTTTGGGGG ATTCGGCGAC ATTTTCTCCC GCATCGATGC CCAGGGGGAC
CTTCTCAACC ACCTGACCAC CCTCGGTGAC CCTGGCGAGA CCACCTACGC CCGATGGCTG
ACCACCCTTT ATCTTTCCAT GGGCGCCATC ATGTTCCTTC CCCGCCAGTT CCACATCATG
GTCATCGAGA ACTGCGATGA AAACCATATC AAAAAAGCCA TGTGGCTGCT GCCGGCCTAC
ATGTTTCTCA TCAACCTGTT CGTGGTCCCC ATCGCCCTCG GCGGCATCCT CCACACCGGC
GGAGCCCTCG GGGCCGACTT CTTTGTCCTC TCCCTCCCGC TGCAGAGCGG CCACTCGTGG
CTGGCGCTGC TGGCGTTTCT CGGAGGCTTC TCGGCCTCCG CCGGGATGGT GATGGTGGAG
TCGGTGGCCA TCTCCACCAT GTTCGTCACC TACCTCCTCA TGCCAATCGT GGTCCGGTTG
ACCCCACGCC CCTGGTTCCC GGCCATGCTC ATCAACCTGA AGCGGCTCTG CATCGCCCTG
GTGATTACGC TCGGCTTTCT TTACCAGACA GTAGTGGGCG AAACCTTCAT GCTCGTGAAC
ATGGGGCTCA TCTCCTTCGC CGCGGCGGCC CAGTTCGGTC CGGCGCTCGT GGGGGGACTC
TACTGGCGCC GGGCGAACAA GGTGGGAGCC CTGACCGGCA TCATACTAGG CTTCATCCTC
TGGCTCTACA CCCTGCTCCT TCCCTCCTTC ATCATGTCGG GCCGGTTCTC CCGGGCGATC
CTCGACGAAG GCCCCTTCGG CATTGCCCTG TTGAAGCCGA CAGAGCTCTT CGGCCTTGCC
GGCTTCGACC TCTGGTCCCA TTCCCTCTTC TGGAGCATGC TCTTCAACGT GGGGGGATAC
GTGGCTCTCT CCATCCTCCT CCCCCAGGGC GACAAGGAAC GGGACCAGGT GCGGAAGTTC
GTCGACGTCT TCACTTCAGA TCGAAACGGC GTCCCCTGGG AAACCAAGCG GATGTCGAAG
CCGGTCACGA TCATGCAGTT CGTGAACCTC ATGTCGAAGT TCATTGGCGA GAAACAGGCC
AACACGGCCA TTGCCGAGTA TTTGGGGAAC CGGGAGATCA CTGCGCAGGG AGGGGTGTCG
GAGTTCGAAC TGCCGAAACT GAAGCGCTTC ACCGAAAAGA CCCTGGCGGG GTCGGTGGGT
GCTGCGGCTG CAGGGGCCAT TGTGGAGAGC TACCTTTCGG ACCTGGGATC ACGGATGGAA
CCGGTCTACG ACATCTTCAG CACGGTCCAG GCGTCGCTCG CCGAAAGCCG CGAGGCCCTC
TACGTGCGCC TCAAGGCATC GGAGCTCATC AACAGGACCC TGGACCTCCA GATCATCATG
GACGATCTGC TGGCGCTTAT CCTCAAAGAA TTCAAGCTCG ATCTGGCGGT TATCAGACTT
ATTGACGAAA AGGGGATCCT GCGGGTCAGG AGCTACCGGG GGAAGGGAAT AGCCGCAATC
ATCGGCAAGG ACTGGGACCC CGAAAGCGAA ACATACATCG GCGAGGCATT CACGGCCAAC
CGGATCCAGT TCGTCAATGA TACCCAATAC ATCACCAAAC CGCTCTCACG GGACCTGATG
GCACGGGAAG GGATCAAGTC CTTCGCCCAC ATCCCCATTG CCCGCAAAGG AGAACACCCG
CTTGGTATTT TGTCGGTCTT CTCCAAGAAC ATCGTTGGTC TCTTCAACGA ACCGTTCCTC
GACCTCCTGG AGAGCCTGGC GGGGCAGTTG GCCCAGGCAG TGAAAATAGT CACGGAAATG
GAAGCAAGGG AGCGGGAGCG CGAGGAAAAG GAACGCATTC TCCTGGAAAA CGCCCGGGTT
CTCAAGGAGA TGGAGATTGC GAAGCAGATC CAGCTTTCGC TCCTCCCCTC CAGCCCTCCG
GCAGTCCAGC GAGTAGAGCT TGCGGGGCGC TGCAAGCCGG CAACCCATGT GGGAGGGGAC
TACTACGACT TCTTCCTGCA CGGCGCCAAC AATATCGACA TGGTCATAGC CGACGTATCA
GGGCACAGCG TGGGGGCGGC CCTCATCATG GCGGAAACCA GGAGCGTGCT CCGGGCCCAG
GCCCGCTCCG ACAAGACGGC CGGGGCAATC CTCGCGACCC TCAATGAGCT GCTCCACGAC
GACCTCTCTG CCGCCGAGCT CTTCATCACC ATGTTCTACG TCCGCTACGA CGCCGAACGC
TGCATCCTCG CCTACGCCAA TGCCGGCCAC AACCCTCCGC TCATCTTCCG CGAGGGTCAG
CGTGCCTGCG TGGAGTTGGA TGCCGAGGGG CTCATCCTTG GCGTAAAACG GGACGTTCAG
TTCGAGGAAA AGATCATTTC CCTCCAGCAA GGCGACGTGG TGCTCCTCTA TACCGACGGC
ATCACCGAAG CCCAGAACCC AGCTGGAGAA TTCTTCGGCT CAGGGCGCCT CTGCGACATC
CTCACCCAAA ACCATGCCCG GCCCGCGGAG GCCATTATCG AAACCATCCT CGCGGAAGTT
GAAAGCTTCA GTGCCACATC GGTCATCAAC GACGACATTT CCATGGTCGT TTTCAAAGTA
TTTCCGTCCC GACAGTTAAT GAAGCAAAAT CAGAGCGCAG CGGAACCAAT TGGTGTACAA
TAA
 
Protein sequence
MILSIELVVG VSLLYIVLLF GVAYYADRKR EEGKSIIANP YVYALSIAVY HTSWTFYGSV 
GKAATTGLDF LLVYLGPTLM AFTWWFLLRK IVRISKENNI TSIADFISSR YGKSQWLGAV
ITIIAIFGVM PYIALQLKAV SSTFDIICGY PYIQLPLLHK NYPFSLHTNF FAALILSIFS
MIFGARRQNS SERRHEGLVA AVAVESVVKL ASFLAVGTFI TYGLFGGFGD IFSRIDAQGD
LLNHLTTLGD PGETTYARWL TTLYLSMGAI MFLPRQFHIM VIENCDENHI KKAMWLLPAY
MFLINLFVVP IALGGILHTG GALGADFFVL SLPLQSGHSW LALLAFLGGF SASAGMVMVE
SVAISTMFVT YLLMPIVVRL TPRPWFPAML INLKRLCIAL VITLGFLYQT VVGETFMLVN
MGLISFAAAA QFGPALVGGL YWRRANKVGA LTGIILGFIL WLYTLLLPSF IMSGRFSRAI
LDEGPFGIAL LKPTELFGLA GFDLWSHSLF WSMLFNVGGY VALSILLPQG DKERDQVRKF
VDVFTSDRNG VPWETKRMSK PVTIMQFVNL MSKFIGEKQA NTAIAEYLGN REITAQGGVS
EFELPKLKRF TEKTLAGSVG AAAAGAIVES YLSDLGSRME PVYDIFSTVQ ASLAESREAL
YVRLKASELI NRTLDLQIIM DDLLALILKE FKLDLAVIRL IDEKGILRVR SYRGKGIAAI
IGKDWDPESE TYIGEAFTAN RIQFVNDTQY ITKPLSRDLM AREGIKSFAH IPIARKGEHP
LGILSVFSKN IVGLFNEPFL DLLESLAGQL AQAVKIVTEM EAREREREEK ERILLENARV
LKEMEIAKQI QLSLLPSSPP AVQRVELAGR CKPATHVGGD YYDFFLHGAN NIDMVIADVS
GHSVGAALIM AETRSVLRAQ ARSDKTAGAI LATLNELLHD DLSAAELFIT MFYVRYDAER
CILAYANAGH NPPLIFREGQ RACVELDAEG LILGVKRDVQ FEEKIISLQQ GDVVLLYTDG
ITEAQNPAGE FFGSGRLCDI LTQNHARPAE AIIETILAEV ESFSATSVIN DDISMVVFKV
FPSRQLMKQN QSAAEPIGVQ