Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1230 |
Symbol | |
ID | 3738407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 1384969 |
End bp | 1388271 |
Gene Length | 3303 bp |
Protein Length | 1100 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637778510 |
Product | serine phosphatase |
Protein accession | YP_384191 |
Protein GI | 78222444 |
COG category | [E] Amino acid transport and metabolism [K] Transcription [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0591] Na+/proline symporter [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.081901 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCCTGA GCATTGAACT GGTGGTCGGA GTATCGCTCC TCTACATCGT CCTGCTCTTC GGGGTTGCGT ACTATGCCGA CAGAAAGCGG GAAGAGGGAA AGAGCATTAT CGCCAACCCC TATGTCTACG CTCTCTCCAT CGCCGTGTAC CACACCTCGT GGACGTTCTA CGGCAGCGTC GGCAAGGCGG CCACCACCGG CCTCGACTTT CTTCTCGTCT ATCTGGGTCC CACCCTCATG GCATTCACCT GGTGGTTTCT CCTGCGCAAG ATCGTCCGGA TCAGCAAGGA GAACAACATC ACCTCCATCG CCGACTTCAT CAGTTCCCGC TACGGCAAAT CCCAATGGCT CGGGGCCGTC ATCACCATCA TCGCCATCTT CGGAGTAATG CCCTACATCG CCCTTCAGCT CAAGGCGGTG TCCAGCACCT TTGACATCAT CTGCGGCTAC CCCTACATCC AGCTCCCGCT GCTCCACAAA AACTACCCCT TCTCGCTGCA CACCAACTTC TTCGCAGCTC TCATCCTGAG CATCTTCAGC ATGATCTTCG GCGCCCGGCG CCAGAATTCC TCGGAACGAC GCCACGAGGG TCTCGTGGCC GCAGTTGCCG TGGAGTCGGT CGTCAAACTG GCTTCATTCC TCGCCGTCGG CACGTTCATC ACCTACGGGC TCTTTGGGGG ATTCGGCGAC ATTTTCTCCC GCATCGATGC CCAGGGGGAC CTTCTCAACC ACCTGACCAC CCTCGGTGAC CCTGGCGAGA CCACCTACGC CCGATGGCTG ACCACCCTTT ATCTTTCCAT GGGCGCCATC ATGTTCCTTC CCCGCCAGTT CCACATCATG GTCATCGAGA ACTGCGATGA AAACCATATC AAAAAAGCCA TGTGGCTGCT GCCGGCCTAC ATGTTTCTCA TCAACCTGTT CGTGGTCCCC ATCGCCCTCG GCGGCATCCT CCACACCGGC GGAGCCCTCG GGGCCGACTT CTTTGTCCTC TCCCTCCCGC TGCAGAGCGG CCACTCGTGG CTGGCGCTGC TGGCGTTTCT CGGAGGCTTC TCGGCCTCCG CCGGGATGGT GATGGTGGAG TCGGTGGCCA TCTCCACCAT GTTCGTCACC TACCTCCTCA TGCCAATCGT GGTCCGGTTG ACCCCACGCC CCTGGTTCCC GGCCATGCTC ATCAACCTGA AGCGGCTCTG CATCGCCCTG GTGATTACGC TCGGCTTTCT TTACCAGACA GTAGTGGGCG AAACCTTCAT GCTCGTGAAC ATGGGGCTCA TCTCCTTCGC CGCGGCGGCC CAGTTCGGTC CGGCGCTCGT GGGGGGACTC TACTGGCGCC GGGCGAACAA GGTGGGAGCC CTGACCGGCA TCATACTAGG CTTCATCCTC TGGCTCTACA CCCTGCTCCT TCCCTCCTTC ATCATGTCGG GCCGGTTCTC CCGGGCGATC CTCGACGAAG GCCCCTTCGG CATTGCCCTG TTGAAGCCGA CAGAGCTCTT CGGCCTTGCC GGCTTCGACC TCTGGTCCCA TTCCCTCTTC TGGAGCATGC TCTTCAACGT GGGGGGATAC GTGGCTCTCT CCATCCTCCT CCCCCAGGGC GACAAGGAAC GGGACCAGGT GCGGAAGTTC GTCGACGTCT TCACTTCAGA TCGAAACGGC GTCCCCTGGG AAACCAAGCG GATGTCGAAG CCGGTCACGA TCATGCAGTT CGTGAACCTC ATGTCGAAGT TCATTGGCGA GAAACAGGCC AACACGGCCA TTGCCGAGTA TTTGGGGAAC CGGGAGATCA CTGCGCAGGG AGGGGTGTCG GAGTTCGAAC TGCCGAAACT GAAGCGCTTC ACCGAAAAGA CCCTGGCGGG GTCGGTGGGT GCTGCGGCTG CAGGGGCCAT TGTGGAGAGC TACCTTTCGG ACCTGGGATC ACGGATGGAA CCGGTCTACG ACATCTTCAG CACGGTCCAG GCGTCGCTCG CCGAAAGCCG CGAGGCCCTC TACGTGCGCC TCAAGGCATC GGAGCTCATC AACAGGACCC TGGACCTCCA GATCATCATG GACGATCTGC TGGCGCTTAT CCTCAAAGAA TTCAAGCTCG ATCTGGCGGT TATCAGACTT ATTGACGAAA AGGGGATCCT GCGGGTCAGG AGCTACCGGG GGAAGGGAAT AGCCGCAATC ATCGGCAAGG ACTGGGACCC CGAAAGCGAA ACATACATCG GCGAGGCATT CACGGCCAAC CGGATCCAGT TCGTCAATGA TACCCAATAC ATCACCAAAC CGCTCTCACG GGACCTGATG GCACGGGAAG GGATCAAGTC CTTCGCCCAC ATCCCCATTG CCCGCAAAGG AGAACACCCG CTTGGTATTT TGTCGGTCTT CTCCAAGAAC ATCGTTGGTC TCTTCAACGA ACCGTTCCTC GACCTCCTGG AGAGCCTGGC GGGGCAGTTG GCCCAGGCAG TGAAAATAGT CACGGAAATG GAAGCAAGGG AGCGGGAGCG CGAGGAAAAG GAACGCATTC TCCTGGAAAA CGCCCGGGTT CTCAAGGAGA TGGAGATTGC GAAGCAGATC CAGCTTTCGC TCCTCCCCTC CAGCCCTCCG GCAGTCCAGC GAGTAGAGCT TGCGGGGCGC TGCAAGCCGG CAACCCATGT GGGAGGGGAC TACTACGACT TCTTCCTGCA CGGCGCCAAC AATATCGACA TGGTCATAGC CGACGTATCA GGGCACAGCG TGGGGGCGGC CCTCATCATG GCGGAAACCA GGAGCGTGCT CCGGGCCCAG GCCCGCTCCG ACAAGACGGC CGGGGCAATC CTCGCGACCC TCAATGAGCT GCTCCACGAC GACCTCTCTG CCGCCGAGCT CTTCATCACC ATGTTCTACG TCCGCTACGA CGCCGAACGC TGCATCCTCG CCTACGCCAA TGCCGGCCAC AACCCTCCGC TCATCTTCCG CGAGGGTCAG CGTGCCTGCG TGGAGTTGGA TGCCGAGGGG CTCATCCTTG GCGTAAAACG GGACGTTCAG TTCGAGGAAA AGATCATTTC CCTCCAGCAA GGCGACGTGG TGCTCCTCTA TACCGACGGC ATCACCGAAG CCCAGAACCC AGCTGGAGAA TTCTTCGGCT CAGGGCGCCT CTGCGACATC CTCACCCAAA ACCATGCCCG GCCCGCGGAG GCCATTATCG AAACCATCCT CGCGGAAGTT GAAAGCTTCA GTGCCACATC GGTCATCAAC GACGACATTT CCATGGTCGT TTTCAAAGTA TTTCCGTCCC GACAGTTAAT GAAGCAAAAT CAGAGCGCAG CGGAACCAAT TGGTGTACAA TAA
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Protein sequence | MILSIELVVG VSLLYIVLLF GVAYYADRKR EEGKSIIANP YVYALSIAVY HTSWTFYGSV GKAATTGLDF LLVYLGPTLM AFTWWFLLRK IVRISKENNI TSIADFISSR YGKSQWLGAV ITIIAIFGVM PYIALQLKAV SSTFDIICGY PYIQLPLLHK NYPFSLHTNF FAALILSIFS MIFGARRQNS SERRHEGLVA AVAVESVVKL ASFLAVGTFI TYGLFGGFGD IFSRIDAQGD LLNHLTTLGD PGETTYARWL TTLYLSMGAI MFLPRQFHIM VIENCDENHI KKAMWLLPAY MFLINLFVVP IALGGILHTG GALGADFFVL SLPLQSGHSW LALLAFLGGF SASAGMVMVE SVAISTMFVT YLLMPIVVRL TPRPWFPAML INLKRLCIAL VITLGFLYQT VVGETFMLVN MGLISFAAAA QFGPALVGGL YWRRANKVGA LTGIILGFIL WLYTLLLPSF IMSGRFSRAI LDEGPFGIAL LKPTELFGLA GFDLWSHSLF WSMLFNVGGY VALSILLPQG DKERDQVRKF VDVFTSDRNG VPWETKRMSK PVTIMQFVNL MSKFIGEKQA NTAIAEYLGN REITAQGGVS EFELPKLKRF TEKTLAGSVG AAAAGAIVES YLSDLGSRME PVYDIFSTVQ ASLAESREAL YVRLKASELI NRTLDLQIIM DDLLALILKE FKLDLAVIRL IDEKGILRVR SYRGKGIAAI IGKDWDPESE TYIGEAFTAN RIQFVNDTQY ITKPLSRDLM AREGIKSFAH IPIARKGEHP LGILSVFSKN IVGLFNEPFL DLLESLAGQL AQAVKIVTEM EAREREREEK ERILLENARV LKEMEIAKQI QLSLLPSSPP AVQRVELAGR CKPATHVGGD YYDFFLHGAN NIDMVIADVS GHSVGAALIM AETRSVLRAQ ARSDKTAGAI LATLNELLHD DLSAAELFIT MFYVRYDAER CILAYANAGH NPPLIFREGQ RACVELDAEG LILGVKRDVQ FEEKIISLQQ GDVVLLYTDG ITEAQNPAGE FFGSGRLCDI LTQNHARPAE AIIETILAEV ESFSATSVIN DDISMVVFKV FPSRQLMKQN QSAAEPIGVQ
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