Gene Gmet_1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1227 
Symbol 
ID3738404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1383328 
End bp1384113 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content55% 
IMG OID637778508 
Productprolipoprotein diacylglyceryl transferase 
Protein accessionYP_384189 
Protein GI78222442 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0682] Prolipoprotein diacylglyceryltransferase 
TIGRFAM ID[TIGR00544] prolipoprotein diacylglyceryl transferase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0136152 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTTC CGCACATAGA TCCGGTTTTC CTGCGCATCG GCCCCCTGGA ATTCCGGTGG 
TATGGTCTGA TGTACATACT GGGGTTCATT GCAGCTTATT TTATCGTCCT CCGGAGGGCC
CGGAAGCGTT CCCTTCTCCT TTCAGCGGAC GATGTGGCTG ATATTATCTT TTATCTGGCG
GTGGGGGTGA TTCTTGGCGG TCGGCTGGGA TACATCCTTT TCTACAATGC CCCCTACTAT
CTCGAACATC CCCTGAAGAT ATTCGCCGTT TGGGAAGGGG GAATGTCGTT CCACGGAGGG
CTCATCGGCG TTGTGCTGGC GGGGCTTTTG GTGGCACGGA AAAAGAGGCT GGGGTTCTTT
ACCCTGGCAG ACCTCTGTGT CCTTACCGCT CCGGTGGGGC TCGGTCTGGG GAGGCTGGGC
AATTTCATCA ATGGGGAACT CTACGGGCGA GTCACCGATA TGCCCTGGGG GGTGGTATTC
CGTGAGGGAG GCCCGATGCC GAGGCATCCG TCTCAACTTT ACGAGGCGAT TCTTGAAGGG
CCGGTGCTGT TTATAATTCT GATGGTAGTA GGGAGGAAGG AGCGCCCGGC AGGGGTGGCC
TTCTGGACCT TTGTCTCCTG TTATGGGCTG TTCCGTTTTT TTGTCGAATT TTTCCGGGAG
CCCGACTCTC AGCTGGGTTT TATCATGGGC CCCTTTTCCA TGGGGCAACT GCTCAGTTTT
CCCATGTTTC TTCTCGGACT CGCGATGGTG CTGATCATCA CGAAGAAGGG GAAACGCACC
GAATGA
 
Protein sequence
MQLPHIDPVF LRIGPLEFRW YGLMYILGFI AAYFIVLRRA RKRSLLLSAD DVADIIFYLA 
VGVILGGRLG YILFYNAPYY LEHPLKIFAV WEGGMSFHGG LIGVVLAGLL VARKKRLGFF
TLADLCVLTA PVGLGLGRLG NFINGELYGR VTDMPWGVVF REGGPMPRHP SQLYEAILEG
PVLFIILMVV GRKERPAGVA FWTFVSCYGL FRFFVEFFRE PDSQLGFIMG PFSMGQLLSF
PMFLLGLAMV LIITKKGKRT E