Gene Gmet_1225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1225 
Symbol 
ID3738402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1381791 
End bp1382135 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content61% 
IMG OID637778506 
Producthistidine triad (HIT) protein 
Protein accessionYP_384187 
Protein GI78222440 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.00420168 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACAACT GCATCTTCTG TAAGATCATC AACGGGACCA TTCCCGCCAG GAAGGTCTAC 
GAAGACGACG ACCTCGTCGC CATCGAGGAC ATCAACCCGG TCGCACCGCA CCATATCCTG
CTCATTCCCC GCAAGCACAT CGTGAACGCC CTTGACCTGA CCGCCGGGGA TGACGCTCTT
GTCGGTCGCG TTTTCCGGGC CGCGGCAGCC ATTGCCCGGG AGCGTGGGGT GGACGAGCGG
GGATTCCGCA TCGTTCAAAA CACCAATGCC GATGCAGGCC AGTCGGTCTT TCACATCCAC
TTCCATCTCC TTGCGGGACG GCATCTGGGG TGGCCGCCGG GATAG
 
Protein sequence
MDNCIFCKII NGTIPARKVY EDDDLVAIED INPVAPHHIL LIPRKHIVNA LDLTAGDDAL 
VGRVFRAAAA IARERGVDER GFRIVQNTNA DAGQSVFHIH FHLLAGRHLG WPPG