Gene Gmet_1224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1224 
Symbol 
ID3738401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1379642 
End bp1381813 
Gene Length2172 bp 
Protein Length723 aa 
Translation table11 
GC content63% 
IMG OID637778505 
Productnuclease SbcCD, C subunit, putative 
Protein accessionYP_384186 
Protein GI78222439 
COG category[S] Function unknown 
COG ID[COG4717] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.000926455 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCTGGA TAACCTCCGT GCAACTCCCC GCCTTTGGCC GTTTCGGGGG GGAGGAGTTC 
ACCTTCCGCC GGGGTATGAA CCTGGTGTGC GGCAAGAACG AGGCGGGGAA GTCAACGCTC
CTGGCTGCCA TTGCCGGGAC CATCTTCGGC TTCCGGAGAG AAAAGGACCG GTTCGTCCCC
TGGGGCGGTG GTGAACGTTG CGAGGCCCGG GTGAGCTTCG CCTATGACGA CCGGGAAATG
ACCATCGTCC GCGATTTCCT AACCGACCGG GTCCAGGCGG TGGAGCGTTC CGGAGACAGG
CTCCTGTGGC GGTTCGAGGG AAAGGTCTCT CCGGCGGGGC GGAGCAGCGA GCGGGAGGAG
TACCTGGCGA AGATCGAGGA GGTCTGGGGC TTTGCCGAGG GGGATATCTT TCGGAACTCG
GTCTTCGTGG GCCAACGGGA CCTGAAGATC GAGGGGGACG GCGCCCTCAC CACCCGGATC
AAACAGCTCC TCTCGGGTTT CTCCGAAATG GATTACGACG CGGTGGTGGA CAGCCTCGAA
AAGGAGCTCT ACGAGTTGAC CAGACGCCCC GGCGGGAGGG CCAAGGATCG TGAGTTGGAA
GAGGTGCGCG CTCGGATGGC CGAGTTGGCC GAGGCCTGGC GCTCGGCCAG TCGGACCATG
GAGGAAGTCT GCAAGGCGGA AGCGGAGCTG GCGGAGCTTC GGGGCTTCAT CGACGCCAGC
CGGGCCGACC TGGAGAAGGG GGAGAAGTAC CTTCAACGGG TGAAAAAGTA CCATGAGGCC
ACGGTCCGTG AAGCGGTGCT GAGCAAGGAG TTCGACCGTA TCCAGACGGA GCGGGAAAAG
GTGGAGGCCC TTGAGGCGCA GCGGAGGACC ATTGAGGCAC GGCTTGCCCC CCTGGGGAAT
CTGACGGAAT TGCCCGATGG CTTCGACAGG ACCATCGAGG CCTACTGCGC CGCCAGCGTG
CGGCTGGAGC AGCTTGAAGA GGAGATGGCA GGGCTGACCG TGGAGGCAGA TGATGTTCGC
AAAGTGCCTC TCGGGCTGCT TCTGTCACCC ATTCTCGCGT GGGGGGCGGC TGTTGCGGCT
TGGTTCCTCG TGCCCGCCAC TGCCTACGTG GTGACCGGCA TTGCCCTTGC GGCGACCCTG
GCCGTTGTTG TCTATGCCGC CCGGTTGAGC AGCGCGCGCA ATGCCAATGC AGCCCGCCGC
CAGGGGAGGA TCGACGGCCT CGCTGTCGAG ATCGACCGAC TACGCAGCGA GGCAGCCCGT
CACGGGGGAG CGGTTGCGGA GCATCTTGGC GACATCGACC CGGCCAGCGC CCGGGGGATT
CTTGAGGAGA TGGAAGGAGT CGAGGAGATC GTTGCCGAGC GCGACCAGGT GGCAAGCGCC
CTCAAGGTGC TCTCTCCTTT GGACGATCTC AAGGCTCAGG GAGCGGAGCT AGCTCGGGAG
TTGGCCGTGG TGCGGGAAAC CATGGAAAGC GTTGTCGGCA AGGGGTTTCC GGTCATGTCA
CACGAGGAGT TCACCGCCGC CGAGGCGAAG ATGCAGCGGC TGGCCGGGGA GGTGAAGGAG
AAGGAGCGGG CCGCCCTCGT CAAGGAGCAG GAGTTGGCGG TACTTCGCAC GGGGGGGCTC
GACCTTGAGG CCATCGCCGA GGAGGGAGAA GAACTCAAGT CCCGTGAGCA GCGACTCGTG
CGGCGGACCG GCGCGTTGCG GCTCGCCGTG GAGCTTCTGC GGGAAACCCT CGATGAATAC
CGGGCCACGT ACCTGGCACG GCTCTCCTCG GAGATCAACG GGAAGCTCTA TAACCTCACG
GCCGGCAGGT ATCGCGAGGC CCGTCTCGAC GACAATTTCA ACCTCACTAT CGGCGCCGAC
GGTGAGCTCA GGCCGGCAGA GGCCTACAGT TGCGGAGTCC AGGACCAGGC CTATCTTGCC
TCCCGGCTTG CCCTGGGGGG GATACTCTCT CGGGGGAGAA AATTGCCTTT TCTTCTCGAC
GACCCTTTGG TAAATTTTGA TGACGAGCGA AAAACTGCCG TTCTGGTTAC ACTTAACCTC
ATTGCTTCAG GCCACCAGGT CATCCTCTTT GTTCATGACG AACGCTATCT CCGGCTCAAG
GGGGCAGACC TCTGGCATCG AATCCGAATC GACATGAAAG GAAAACCGGA TGGACAACTG
CATCTTCTGT AA
 
Protein sequence
MLWITSVQLP AFGRFGGEEF TFRRGMNLVC GKNEAGKSTL LAAIAGTIFG FRREKDRFVP 
WGGGERCEAR VSFAYDDREM TIVRDFLTDR VQAVERSGDR LLWRFEGKVS PAGRSSEREE
YLAKIEEVWG FAEGDIFRNS VFVGQRDLKI EGDGALTTRI KQLLSGFSEM DYDAVVDSLE
KELYELTRRP GGRAKDRELE EVRARMAELA EAWRSASRTM EEVCKAEAEL AELRGFIDAS
RADLEKGEKY LQRVKKYHEA TVREAVLSKE FDRIQTEREK VEALEAQRRT IEARLAPLGN
LTELPDGFDR TIEAYCAASV RLEQLEEEMA GLTVEADDVR KVPLGLLLSP ILAWGAAVAA
WFLVPATAYV VTGIALAATL AVVVYAARLS SARNANAARR QGRIDGLAVE IDRLRSEAAR
HGGAVAEHLG DIDPASARGI LEEMEGVEEI VAERDQVASA LKVLSPLDDL KAQGAELARE
LAVVRETMES VVGKGFPVMS HEEFTAAEAK MQRLAGEVKE KERAALVKEQ ELAVLRTGGL
DLEAIAEEGE ELKSREQRLV RRTGALRLAV ELLRETLDEY RATYLARLSS EINGKLYNLT
AGRYREARLD DNFNLTIGAD GELRPAEAYS CGVQDQAYLA SRLALGGILS RGRKLPFLLD
DPLVNFDDER KTAVLVTLNL IASGHQVILF VHDERYLRLK GADLWHRIRI DMKGKPDGQL
HLL