Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1224 |
Symbol | |
ID | 3738401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1379642 |
End bp | 1381813 |
Gene Length | 2172 bp |
Protein Length | 723 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637778505 |
Product | nuclease SbcCD, C subunit, putative |
Protein accession | YP_384186 |
Protein GI | 78222439 |
COG category | [S] Function unknown |
COG ID | [COG4717] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.000926455 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTCTGGA TAACCTCCGT GCAACTCCCC GCCTTTGGCC GTTTCGGGGG GGAGGAGTTC ACCTTCCGCC GGGGTATGAA CCTGGTGTGC GGCAAGAACG AGGCGGGGAA GTCAACGCTC CTGGCTGCCA TTGCCGGGAC CATCTTCGGC TTCCGGAGAG AAAAGGACCG GTTCGTCCCC TGGGGCGGTG GTGAACGTTG CGAGGCCCGG GTGAGCTTCG CCTATGACGA CCGGGAAATG ACCATCGTCC GCGATTTCCT AACCGACCGG GTCCAGGCGG TGGAGCGTTC CGGAGACAGG CTCCTGTGGC GGTTCGAGGG AAAGGTCTCT CCGGCGGGGC GGAGCAGCGA GCGGGAGGAG TACCTGGCGA AGATCGAGGA GGTCTGGGGC TTTGCCGAGG GGGATATCTT TCGGAACTCG GTCTTCGTGG GCCAACGGGA CCTGAAGATC GAGGGGGACG GCGCCCTCAC CACCCGGATC AAACAGCTCC TCTCGGGTTT CTCCGAAATG GATTACGACG CGGTGGTGGA CAGCCTCGAA AAGGAGCTCT ACGAGTTGAC CAGACGCCCC GGCGGGAGGG CCAAGGATCG TGAGTTGGAA GAGGTGCGCG CTCGGATGGC CGAGTTGGCC GAGGCCTGGC GCTCGGCCAG TCGGACCATG GAGGAAGTCT GCAAGGCGGA AGCGGAGCTG GCGGAGCTTC GGGGCTTCAT CGACGCCAGC CGGGCCGACC TGGAGAAGGG GGAGAAGTAC CTTCAACGGG TGAAAAAGTA CCATGAGGCC ACGGTCCGTG AAGCGGTGCT GAGCAAGGAG TTCGACCGTA TCCAGACGGA GCGGGAAAAG GTGGAGGCCC TTGAGGCGCA GCGGAGGACC ATTGAGGCAC GGCTTGCCCC CCTGGGGAAT CTGACGGAAT TGCCCGATGG CTTCGACAGG ACCATCGAGG CCTACTGCGC CGCCAGCGTG CGGCTGGAGC AGCTTGAAGA GGAGATGGCA GGGCTGACCG TGGAGGCAGA TGATGTTCGC AAAGTGCCTC TCGGGCTGCT TCTGTCACCC ATTCTCGCGT GGGGGGCGGC TGTTGCGGCT TGGTTCCTCG TGCCCGCCAC TGCCTACGTG GTGACCGGCA TTGCCCTTGC GGCGACCCTG GCCGTTGTTG TCTATGCCGC CCGGTTGAGC AGCGCGCGCA ATGCCAATGC AGCCCGCCGC CAGGGGAGGA TCGACGGCCT CGCTGTCGAG ATCGACCGAC TACGCAGCGA GGCAGCCCGT CACGGGGGAG CGGTTGCGGA GCATCTTGGC GACATCGACC CGGCCAGCGC CCGGGGGATT CTTGAGGAGA TGGAAGGAGT CGAGGAGATC GTTGCCGAGC GCGACCAGGT GGCAAGCGCC CTCAAGGTGC TCTCTCCTTT GGACGATCTC AAGGCTCAGG GAGCGGAGCT AGCTCGGGAG TTGGCCGTGG TGCGGGAAAC CATGGAAAGC GTTGTCGGCA AGGGGTTTCC GGTCATGTCA CACGAGGAGT TCACCGCCGC CGAGGCGAAG ATGCAGCGGC TGGCCGGGGA GGTGAAGGAG AAGGAGCGGG CCGCCCTCGT CAAGGAGCAG GAGTTGGCGG TACTTCGCAC GGGGGGGCTC GACCTTGAGG CCATCGCCGA GGAGGGAGAA GAACTCAAGT CCCGTGAGCA GCGACTCGTG CGGCGGACCG GCGCGTTGCG GCTCGCCGTG GAGCTTCTGC GGGAAACCCT CGATGAATAC CGGGCCACGT ACCTGGCACG GCTCTCCTCG GAGATCAACG GGAAGCTCTA TAACCTCACG GCCGGCAGGT ATCGCGAGGC CCGTCTCGAC GACAATTTCA ACCTCACTAT CGGCGCCGAC GGTGAGCTCA GGCCGGCAGA GGCCTACAGT TGCGGAGTCC AGGACCAGGC CTATCTTGCC TCCCGGCTTG CCCTGGGGGG GATACTCTCT CGGGGGAGAA AATTGCCTTT TCTTCTCGAC GACCCTTTGG TAAATTTTGA TGACGAGCGA AAAACTGCCG TTCTGGTTAC ACTTAACCTC ATTGCTTCAG GCCACCAGGT CATCCTCTTT GTTCATGACG AACGCTATCT CCGGCTCAAG GGGGCAGACC TCTGGCATCG AATCCGAATC GACATGAAAG GAAAACCGGA TGGACAACTG CATCTTCTGT AA
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Protein sequence | MLWITSVQLP AFGRFGGEEF TFRRGMNLVC GKNEAGKSTL LAAIAGTIFG FRREKDRFVP WGGGERCEAR VSFAYDDREM TIVRDFLTDR VQAVERSGDR LLWRFEGKVS PAGRSSEREE YLAKIEEVWG FAEGDIFRNS VFVGQRDLKI EGDGALTTRI KQLLSGFSEM DYDAVVDSLE KELYELTRRP GGRAKDRELE EVRARMAELA EAWRSASRTM EEVCKAEAEL AELRGFIDAS RADLEKGEKY LQRVKKYHEA TVREAVLSKE FDRIQTEREK VEALEAQRRT IEARLAPLGN LTELPDGFDR TIEAYCAASV RLEQLEEEMA GLTVEADDVR KVPLGLLLSP ILAWGAAVAA WFLVPATAYV VTGIALAATL AVVVYAARLS SARNANAARR QGRIDGLAVE IDRLRSEAAR HGGAVAEHLG DIDPASARGI LEEMEGVEEI VAERDQVASA LKVLSPLDDL KAQGAELARE LAVVRETMES VVGKGFPVMS HEEFTAAEAK MQRLAGEVKE KERAALVKEQ ELAVLRTGGL DLEAIAEEGE ELKSREQRLV RRTGALRLAV ELLRETLDEY RATYLARLSS EINGKLYNLT AGRYREARLD DNFNLTIGAD GELRPAEAYS CGVQDQAYLA SRLALGGILS RGRKLPFLLD DPLVNFDDER KTAVLVTLNL IASGHQVILF VHDERYLRLK GADLWHRIRI DMKGKPDGQL HLL
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