Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1212 |
Symbol | |
ID | 3738752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1359697 |
End bp | 1361073 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637778492 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_384174 |
Protein GI | 78222427 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2202] FOG: PAS/PAC domain [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.377857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.00290095 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGTACC GTCGCCAGGA CACTCTCCCC GAAATCGGCC GTTCCGATTC AGAGGCCACG AGATGGAGTG CCGCAAAAAT TGTCGTCGTC TATCTCTCGT TCGGCATTGT CTGGATGCTT GCCACCGTCA CCTGGATGGG GTTCGGAGCG GCAATGGTGT GGCAGGCGCT CTTTATCCTG CTGTCCGCCG GTCTGGTGGC AATTCTTGTG CGTCATCTCA CGGGGGAGTT GGAACGGATC CGGAGTCTGC TGCGGGATGG CGAGCGCCGC TACTATCAAC TGGCCGAACT CCTGCCACAG CCGGTCTATG AGGCAGATCC GGACGGACGC ATCACCTTCG CCAACCGCAA GGCATTCACG GCCTTCGGTT TTACCGAGGA AGACTTCGCC CAGGGGATAA ACATTCTGAA AGCAGTTGCT CCCCACGATC AGGACCGGGC CCACCAAAGC CGCGTCGGCC TCCTTGCCGG TGTTCACGAT CCAGGAACCG CTACCCAGTA TACGGTCCGC CGCAAGGACG GGAGCACGTT TCCTGCAATC GTCTGCACTG CTCCCCTCAT CAGGAGAGGA AACGCCGTCG GCACTTGCGG CGTCGTGGCC GACATCAGCG AACAGAAACA GAGAGAAGCG GAGATATCCC GCCTGAACCT GGAACTGGAG CAGCGGGTTC AGGAGCGCAC TGCCGAGCTC GCATCGGCCC TGAAACACAT GGAATCGTTC TCCTATTCCA TTTCCCACGA CCTGCGGGCA CCGCTCTGTG CCATTGAGGG GTTTTCCCGC GTTCTCATTG AGGATTTTGG CGAGCAACTC CCTCCCCGGA TGCTCCTGTA CCTTCAGCGA ATATCCCACA ACGTCCATCG GATGGCCTCC CTCATCGACG ACATTCTGGT CTTCTCCCGC TACAGCCTCT CCCCGCTTCA AAAGCGCCCA GTTCAGATCG CGGACCTGGT ACGTGCAATT CTGGATGAAC TCCTGAACGG GCAAGACGAC CGCCGTGTGC AGGTGACGGT CGGTGATCTG CCTCCCTGTG AGTCTGATCC GACCCTCCTG CGGCAGGTTC TGTTCAACCT GCTGGACAAT GCACTCAAGT ATAGCCGCTA CCGGGATCCG GCAATAATTG AGGTCAACGC GGTGATGGAC GGACCGGTGC CCGTCTATTT TGTCCGGGAC AACGGCGCCG GCTTTGACAT GGAATACGTC CACAAGCTGT TTTCCGTCTT CGAGAGGTTG CATGGGCGGG AGGAGTTCGA GGGAACCGGC GTCGGATTGG CAATTGTGCA GAACATCATC CAGCGGCACG GGGGCGACGT TTGGGCCGAG GGGGCCGTCG GCCAAGGCTC TACCTTTTAC TTTACGCTGC CGTCGGCGCC GAATTGA
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Protein sequence | MPYRRQDTLP EIGRSDSEAT RWSAAKIVVV YLSFGIVWML ATVTWMGFGA AMVWQALFIL LSAGLVAILV RHLTGELERI RSLLRDGERR YYQLAELLPQ PVYEADPDGR ITFANRKAFT AFGFTEEDFA QGINILKAVA PHDQDRAHQS RVGLLAGVHD PGTATQYTVR RKDGSTFPAI VCTAPLIRRG NAVGTCGVVA DISEQKQREA EISRLNLELE QRVQERTAEL ASALKHMESF SYSISHDLRA PLCAIEGFSR VLIEDFGEQL PPRMLLYLQR ISHNVHRMAS LIDDILVFSR YSLSPLQKRP VQIADLVRAI LDELLNGQDD RRVQVTVGDL PPCESDPTLL RQVLFNLLDN ALKYSRYRDP AIIEVNAVMD GPVPVYFVRD NGAGFDMEYV HKLFSVFERL HGREEFEGTG VGLAIVQNII QRHGGDVWAE GAVGQGSTFY FTLPSAPN
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