| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1212 |
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| Symbol | |
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| ID | 3738752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1359697 |
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| End bp | 1361073 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637778492 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_384174 |
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| Protein GI | 78222427 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.377857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.00290095 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGTACC GTCGCCAGGA CACTCTCCCC GAAATCGGCC GTTCCGATTC AGAGGCCACG
AGATGGAGTG CCGCAAAAAT TGTCGTCGTC TATCTCTCGT TCGGCATTGT CTGGATGCTT
GCCACCGTCA CCTGGATGGG GTTCGGAGCG GCAATGGTGT GGCAGGCGCT CTTTATCCTG
CTGTCCGCCG GTCTGGTGGC AATTCTTGTG CGTCATCTCA CGGGGGAGTT GGAACGGATC
CGGAGTCTGC TGCGGGATGG CGAGCGCCGC TACTATCAAC TGGCCGAACT CCTGCCACAG
CCGGTCTATG AGGCAGATCC GGACGGACGC ATCACCTTCG CCAACCGCAA GGCATTCACG
GCCTTCGGTT TTACCGAGGA AGACTTCGCC CAGGGGATAA ACATTCTGAA AGCAGTTGCT
CCCCACGATC AGGACCGGGC CCACCAAAGC CGCGTCGGCC TCCTTGCCGG TGTTCACGAT
CCAGGAACCG CTACCCAGTA TACGGTCCGC CGCAAGGACG GGAGCACGTT TCCTGCAATC
GTCTGCACTG CTCCCCTCAT CAGGAGAGGA AACGCCGTCG GCACTTGCGG CGTCGTGGCC
GACATCAGCG AACAGAAACA GAGAGAAGCG GAGATATCCC GCCTGAACCT GGAACTGGAG
CAGCGGGTTC AGGAGCGCAC TGCCGAGCTC GCATCGGCCC TGAAACACAT GGAATCGTTC
TCCTATTCCA TTTCCCACGA CCTGCGGGCA CCGCTCTGTG CCATTGAGGG GTTTTCCCGC
GTTCTCATTG AGGATTTTGG CGAGCAACTC CCTCCCCGGA TGCTCCTGTA CCTTCAGCGA
ATATCCCACA ACGTCCATCG GATGGCCTCC CTCATCGACG ACATTCTGGT CTTCTCCCGC
TACAGCCTCT CCCCGCTTCA AAAGCGCCCA GTTCAGATCG CGGACCTGGT ACGTGCAATT
CTGGATGAAC TCCTGAACGG GCAAGACGAC CGCCGTGTGC AGGTGACGGT CGGTGATCTG
CCTCCCTGTG AGTCTGATCC GACCCTCCTG CGGCAGGTTC TGTTCAACCT GCTGGACAAT
GCACTCAAGT ATAGCCGCTA CCGGGATCCG GCAATAATTG AGGTCAACGC GGTGATGGAC
GGACCGGTGC CCGTCTATTT TGTCCGGGAC AACGGCGCCG GCTTTGACAT GGAATACGTC
CACAAGCTGT TTTCCGTCTT CGAGAGGTTG CATGGGCGGG AGGAGTTCGA GGGAACCGGC
GTCGGATTGG CAATTGTGCA GAACATCATC CAGCGGCACG GGGGCGACGT TTGGGCCGAG
GGGGCCGTCG GCCAAGGCTC TACCTTTTAC TTTACGCTGC CGTCGGCGCC GAATTGA
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| Protein sequence | MPYRRQDTLP EIGRSDSEAT RWSAAKIVVV YLSFGIVWML ATVTWMGFGA AMVWQALFIL
LSAGLVAILV RHLTGELERI RSLLRDGERR YYQLAELLPQ PVYEADPDGR ITFANRKAFT
AFGFTEEDFA QGINILKAVA PHDQDRAHQS RVGLLAGVHD PGTATQYTVR RKDGSTFPAI
VCTAPLIRRG NAVGTCGVVA DISEQKQREA EISRLNLELE QRVQERTAEL ASALKHMESF
SYSISHDLRA PLCAIEGFSR VLIEDFGEQL PPRMLLYLQR ISHNVHRMAS LIDDILVFSR
YSLSPLQKRP VQIADLVRAI LDELLNGQDD RRVQVTVGDL PPCESDPTLL RQVLFNLLDN
ALKYSRYRDP AIIEVNAVMD GPVPVYFVRD NGAGFDMEYV HKLFSVFERL HGREEFEGTG
VGLAIVQNII QRHGGDVWAE GAVGQGSTFY FTLPSAPN
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