| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1205 |
|---|
| Symbol | |
|---|
| ID | 3738745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 1351912 |
|---|
| End bp | 1352280 |
|---|
| Gene Length | 369 bp |
|---|
| Protein Length | 122 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637778485 |
|---|
| Product | LrgA |
|---|
| Protein accession | YP_384167 |
|---|
| Protein GI | 78222420 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.00283313 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.0677491 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGGCT CTCTAACCCT CATTCTCATC TGCCAGCTGA TCGGAGAGAT CATAACCCGG
CTGACCAGGA TTCCCGTGCC TGGTCCGGTA ATCGGGATGG TTCTCCTTTT CTGCGGCCTG
GTCTTTTTCC CTCGGCGTAT GCCCAGCGAG GTGGAAACCG TCGGCGGATT CCTGCTGCGT
TACCTGGCCC TGCTTTTCGT CCCTGCCGGG GTAGGCGTCA TCACCCATCT CGATCTTCTG
ATGAAGTCAT GGGCTCCGCT ATTCGGCGCC ATCATCGTCG GCACCCTTGC GACAATCGGG
GTAACCGGTC TGGTCATGAA ATTCCTGAAC CGCCGACTCG CCTGTGCACA CGAGGAGACC
CGGCAATGA
|
|---|
| Protein sequence | MLGSLTLILI CQLIGEIITR LTRIPVPGPV IGMVLLFCGL VFFPRRMPSE VETVGGFLLR
YLALLFVPAG VGVITHLDLL MKSWAPLFGA IIVGTLATIG VTGLVMKFLN RRLACAHEET
RQ
|
|---|
| |