| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1185 |
|---|
| Symbol | |
|---|
| ID | 3738456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1316646 |
|---|
| End bp | 1317740 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637778465 |
|---|
| Product | IS204/IS1001/IS1096/IS1165 transposase |
|---|
| Protein accession | YP_384147 |
|---|
| Protein GI | 78222400 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3464] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 60 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGTGTG GCTCGTGCGG TGGGCGTTGC ACAAGCGTCC ATGAAACGAC CAAGCGCGTA
ATTCGAGATT TGCCGATTCT CGATGCTCAG ACTTATCTGA TCGTTCACCG CCGCAGGCTG
CTGTGCCCTC AGTGTGGGCC AACGCTGGAG CGTCTGTCAT GGCTGGCGAA ATACGCCCGC
GTGACGCGCA GGCTTGCAGA GAGCGTAGCG CGACTGTGTG GTGTCGTGTC TGTGAAGCAC
GTGGCGCAGT ATCTGGGGCT TTCTTGGGAC CAGGTGAAGG AAATCGACAA GCGCTCACTC
ACAGAGCGGG TCGGCACCGT CGACCTCTCA AACATCGAAG TTCTCGGGAT GGATGAGTTC
GCCCTTCACA AGGGGCACCG CTATGCGACG GTTATCATCG AGCCATACCG TAAGGAAGTC
TTATGGATCG GCAAAGGCAG GAGTCGCGAG AGTATCCGTC CTTTCTTCAC GCAGCTTGGC
CCACATGGCT GTAAACGGCT CAAAGCGGTC GTGATGGATA TGAACGCATC ATATGAGGAG
GAAATCAAGC AGCACTCGCC CCAGGCAGAC ATAGTCTACG ACCTGTTCCA TGTGGTGGCG
AAGTATGGCA GGGAAGTGAT CGACAGGGTG CGAGTCGATG AGGCAAACCG CCTGAAGGAA
GACAAGAAGG CACGGAAGGT AGTCAAAACA TCGCGGTGGT TGCTGCTACG AAACAGCGAG
AACGTCAAGG GCGACGACAT GCTTCGCCTC CAGGAACTGT TGGAGGCAAA CCGCAGCCTC
CTTACGGTCT ACCTGCTCAA AGACGATCTG AAGCAACTGT GGAAGTTTAC CTGCATTGAA
GAGGCGGGAC TATTCTGGGA GCAGTGGCAC CAAAGGGCGA TGGAGAGTGG AATACCGCCA
CTCATCCTGT TTGCCCGCCG GCTAAAGGGC TATCTCCAAG GAATCCTCAA CCACTGCCTC
TGGCCCCTTC ACACCGGAAT CCTCGAAGGC ATCAATAACA AGATCAAGGT GATCAAAAGA
ATGGCCTACG GCTTCCGGGA TCACGAATAC TTCTTTCTCA AGATCAGAGC CGCTTTCCCC
GGAATTCCCG GATGA
|
|---|
| Protein sequence | MVCGSCGGRC TSVHETTKRV IRDLPILDAQ TYLIVHRRRL LCPQCGPTLE RLSWLAKYAR
VTRRLAESVA RLCGVVSVKH VAQYLGLSWD QVKEIDKRSL TERVGTVDLS NIEVLGMDEF
ALHKGHRYAT VIIEPYRKEV LWIGKGRSRE SIRPFFTQLG PHGCKRLKAV VMDMNASYEE
EIKQHSPQAD IVYDLFHVVA KYGREVIDRV RVDEANRLKE DKKARKVVKT SRWLLLRNSE
NVKGDDMLRL QELLEANRSL LTVYLLKDDL KQLWKFTCIE EAGLFWEQWH QRAMESGIPP
LILFARRLKG YLQGILNHCL WPLHTGILEG INNKIKVIKR MAYGFRDHEY FFLKIRAAFP
GIPG
|
|---|
| |