Gene Gmet_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1170 
Symbol 
ID3740397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1293744 
End bp1294157 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content57% 
IMG OID637778446 
ProductNUDIX hydrolase 
Protein accessionYP_384133 
Protein GI78222386 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID[TIGR00586] mutator mutT protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0000110534 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0271169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCCTC TTATCGTGAC AGCCGCCGTT ATCGAGCATG AAGGCAAGAT CCTTTTAACC 
AGGAGAAAGC CCGATGCTCC CTATCCGCTG CTCTGGGAGT TCCCCGGTGG CAAGCTGGAG
CCCGAGGAAC ACCCAGAAGC ATGTATTGTT CGGGAGGTTC GCGAGGAACT GGCCATGGAT
GTTTCTGTCC ACGGGATATA TGATGTGGTC TATTACCGTT ACCCGGAGCG ACCAGTGCTG
GTTTTGGCCT ACCGGTGCGC CTGGACTGGC GGGGAATTGC GCGAACTGGA CGTGGCCGAC
CACAGTTGGG TTGATCCCGC GGATATTCTC CGCTTCGATC TCCTTCCCGC CGACTACCCT
CTGGCGAAGA AGATAGTTCA CGAGTTCAGC GATGCGGATA CTACTCGTCT CTAG
 
Protein sequence
MLPLIVTAAV IEHEGKILLT RRKPDAPYPL LWEFPGGKLE PEEHPEACIV REVREELAMD 
VSVHGIYDVV YYRYPERPVL VLAYRCAWTG GELRELDVAD HSWVDPADIL RFDLLPADYP
LAKKIVHEFS DADTTRL