| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1169 |
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| Symbol | |
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| ID | 3740396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1292647 |
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| End bp | 1293672 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637778445 |
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| Product | NLP/P60:peptidoglycan-binding LysM |
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| Protein accession | YP_384132 |
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| Protein GI | 78222385 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000000154936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.0379935 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGC GATTGCGACT TACAGCGCTT TCCGTAATCC TCTTAGCCTT TCCCGCCCTG
TCCCACGCCG CAAAAACCCA CAAGATCAGA AAAAGCGAAA CCGTTTACTC TATCGCGAAG
AAGTACCACG TTAGTGCGAA AGATCTAAAA TCGGCCAACA ACCTCACTAA TGCCCGGATA
AAGCCGGGAA CAGTGCTTGT CATCCCGTCT CGCGCCGCAG CAGAGTCAAG CGCGGACTCT
TCCACCCCTG CCAGCTATAA GGTGAAAAAA GGTGATACCC TGGCAAAGGT TGCGCGGAAG
ACCGGCGTTT CCGTGGCTGA GTTGCGACGT TTGAACGGCA TAGGGAAGGG CAGACTCAAG
CCCGGTCGTC TCCTTGCACT CCAGGCAGTG GAATCCAATG AAACGGTTAC CGCGAAGCTT
TCCCTGAAAA AGCCCCTGAA ACACCTTGAT ATCTACGATG AAAAAGAATA CGAGCAGAGT
CTGAGCGAGT TGGTGGAGTT GGACCCGAAC CGTCCAGCTG ACTTCACGAA GAGCGTGAAA
CTCGATGTCG ATGGTGTCTC TGAACTCAAA AAAACTGCCT ACAGCTTCAT CGGCACCAAG
TATCGTTTCG GCGGCACCAC CCGTCGGGGG CTCGACTGTT CCAGTTTTGT CCAGCACGTC
TTCCGCGAGC TCGACGTAAC TCTTCCCCGC ACGGCCCGGG AACAGTTCCA TGTGGGAAAT
TCGGTTGCTC CCGGCGACCT GCAGAAGGGT GACCTCCTCT TCTTCCAGAC CTATGCGCGT
TTCCCGTCCC ATGTTGGCAT CTATCTCGGC AACAACAAGA TGATTCACGC CTCGTCGCGA
GACCGTCGGG TCGTTATTTC CTCTGTTGAT ACTCCCTACT ACCGTTCCCG TTTCCTTGGT
GCGAAGCGGA TTGCCGAGGT TAATCCCGAT ATCCTGAAAC TCGATGACCT GATTTCCGGT
GTTGAGGAAG AAGGGCTCGA GGAAATTTTG ACGAATGACA CCCTTGGGGT CAGTCTTTTG
AAATAG
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| Protein sequence | MSLRLRLTAL SVILLAFPAL SHAAKTHKIR KSETVYSIAK KYHVSAKDLK SANNLTNARI
KPGTVLVIPS RAAAESSADS STPASYKVKK GDTLAKVARK TGVSVAELRR LNGIGKGRLK
PGRLLALQAV ESNETVTAKL SLKKPLKHLD IYDEKEYEQS LSELVELDPN RPADFTKSVK
LDVDGVSELK KTAYSFIGTK YRFGGTTRRG LDCSSFVQHV FRELDVTLPR TAREQFHVGN
SVAPGDLQKG DLLFFQTYAR FPSHVGIYLG NNKMIHASSR DRRVVISSVD TPYYRSRFLG
AKRIAEVNPD ILKLDDLISG VEEEGLEEIL TNDTLGVSLL K
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