| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1162 |
|---|
| Symbol | |
|---|
| ID | 3740389 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 1287679 |
|---|
| End bp | 1288536 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637778438 |
|---|
| Product | methenyltetrahydrofolate cyclohydrolase |
|---|
| Protein accession | YP_384125 |
|---|
| Protein GI | 78222378 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00000000377219 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.00798692 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACAA TCATTGACGG AAAAGCCATC GCTGCCAAGC TGAGGGCGGA AATTGCCACC
GAAGTCAAGA TCCTCAAGGA AAAGGGGATT ATCCCCGGCC TTGCCACGGT CCTTGTGGGG
GAAGACCCCG CCAGCGAGGT CTATGTACGG ATGAAAGGCA ATGCCTGCCA GGAGTTGGGG
ATGCACTCCG TTAAACACAC CCTGCCGGCG ACTACCACTG AAGCAGAACT CCTCGCTCTC
GTGGCCCGGC TCAACAGCGA CCCGACCATC CACGGAATCC TCGTTCAACT CCCCCTCCCG
AAACAGATCA ATTCCGACAC GATTCTCGAG GCCATCTCGC CGGTGAAGGA CGTAGACGGC
TTCCACCCCT ACAACGTCGG CCGGCTTATG GTCGGCAAGC CCACCTTCCA GCCCTGCACC
CCCTATGGCG TCATGGTCAT GCTGCGCGAA GCGGGCGTTG ACCTGGCCGG CAAGGAAGTG
GTCGTCGTGG GGCGCTCAAA TATCGTCGGC AAGCCGGTGG CGCTCATGTG CCTCCAGCAG
CATGCCACGG TCACCATCTG CCACTCGAAA ACCCGTGATT TGCCATCGAA GGTCAAAGAG
GCCGACGTGG TCATCGCCGC CGTGGGGGTT CCCGAGATGA TCAAGGGGGA GTGGATCAAG
GAAGGAGCAG TGGTCATCGA TGTGGGAGTC AACCGGGTCG GCGAGAAGAA GCTTGTGGGG
GATGTGGAGT TCGCCGCAGC ATCCCAGCGG GCATCGGCCA TCACCCCCGT TCCCGGCGGC
GTCGGCCCCA TGACCATCAC CATGCTCCTC TACAACACCC TTGAGGCGGC AAAGAAGACA
GGGGAAGGAA ACCGGTAA
|
|---|
| Protein sequence | MSTIIDGKAI AAKLRAEIAT EVKILKEKGI IPGLATVLVG EDPASEVYVR MKGNACQELG
MHSVKHTLPA TTTEAELLAL VARLNSDPTI HGILVQLPLP KQINSDTILE AISPVKDVDG
FHPYNVGRLM VGKPTFQPCT PYGVMVMLRE AGVDLAGKEV VVVGRSNIVG KPVALMCLQQ
HATVTICHSK TRDLPSKVKE ADVVIAAVGV PEMIKGEWIK EGAVVIDVGV NRVGEKKLVG
DVEFAAASQR ASAITPVPGG VGPMTITMLL YNTLEAAKKT GEGNR
|
|---|
| |