| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1126 |
|---|
| Symbol | |
|---|
| ID | 3741583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1247476 |
|---|
| End bp | 1248087 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637778402 |
|---|
| Product | GPR1/FUN34/yaaH |
|---|
| Protein accession | YP_384089 |
|---|
| Protein GI | 78222342 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1584] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 67 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACAA ATCCGCAAGA CACGGCTGCT GTATTCGAAC TGAACGATAC GACGGCCAAT
CCGGCGCCGC TCGGGCTGCT GGGCTTCGGG ATGACGACCG TTCTGCTCAA TTTGCACAAT
GCCGGGATGT TTCCCATGGA TGCCATGATA CTGAGCATGG GAATTTTCTA TGGCGGCCTG
GGGCAAATCA TCGTCGGCAT CATGGAATGG AGAAAAAACA ATACGTTCGG AGCGACCGCC
TTCACATCCT ATGGCCTCTT CTGGCTCACC CTGGTGGCGC TGATCATCCT TCCGAACACC
GGCTTCATCC AGGCGCCCGA CAATTCTGCC ATGACCGCGT ACCTCGTCAT GTGGGGGCTT
TTTACCGGTG TGCTCTTTGT GGGAACCTTG AGGATGAACA AGGCGCTCCA GGTCGTGTTC
GGCTCGTTGA CGGTCTTGTT CTTCCTCCTC GCGGCTGGTG ATGCAACCGG AAACCACGCC
ATCAAGATCA TCGCCGGTTA TGAAGGGATT TTCTGCGGTC TGTCCGCCAT ATATGCCGGA
CTGGCCCAGG TCATCAACGA GGTCTACGGG AGAACAGTCG CTCCTCTCGG CCTGGTACGC
CAACTGGGGT AA
|
|---|
| Protein sequence | MATNPQDTAA VFELNDTTAN PAPLGLLGFG MTTVLLNLHN AGMFPMDAMI LSMGIFYGGL
GQIIVGIMEW RKNNTFGATA FTSYGLFWLT LVALIILPNT GFIQAPDNSA MTAYLVMWGL
FTGVLFVGTL RMNKALQVVF GSLTVLFFLL AAGDATGNHA IKIIAGYEGI FCGLSAIYAG
LAQVINEVYG RTVAPLGLVR QLG
|
|---|
| |