| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1123 |
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| Symbol | prpD |
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| ID | 3741580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1242953 |
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| End bp | 1244398 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637778399 |
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| Product | 2-methylcitrate dehydratase |
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| Protein accession | YP_384086 |
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| Protein GI | 78222339 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
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| TIGRFAM ID | [TIGR02330] 2-methylcitrate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACGA CTGCCGACGT GAATGTCCGG CCAGCCCCGG ACCAGGTGCT GGTCGACATA
GCCGAGTACG TCACGGGCTA CCGGGTGACG AGCCACGAGG CCCGCGAAAC TGCCCGCTAC
TCCCTGATAG ATGCCCTCGG GTGCGGCATG CTGGCCCTGA CGTTTCCCGA GTGTACCAAG
CTCCTGGGGC CGATCGTCCC CGGAATCGTC GTCCCTCTCG GCGCCCGGGT GCCGGGCACC
CGTTACGAGC TTGACCCGGT CAAGGCGGCC TTTGACATTG GCTGCATCAT CCGGTGGCTC
GACTTCAACG ACACCTGGCT GGCCGCCGAA TGGGGACACC CGTCGGACAA CCTCGGGGCG
ATCCTGGCTG TTGCCGACCA CCTGAGCCGG CGCAACGTTG CCGAAGGAAA CGCTCCCGTG
ACCATGGGCG AGGTGTTGAC CTGCATGGTC ATGGCCCATG AAATCCAGGG GTGCCTGGCC
CTGGAGAACA GCTTCAACCG GGTGGGGCTC GACCACGTCC TGCTGGTCAA AGTCGCCTCG
ACCGCGGTTG TCATGAGACT GCTCGGCGGG ACAAAAGAGC AGATAATCGA TGCCCTGTCC
CAGGCGTGGG TCGACGGCCA GAGCCTCCGC ACCTATCGCC ATGCGCCCAA TGCCGGCAGT
CGCAAATCCT GGGCCGCGGG GGATGCCGTC AGCCGGGCCG TTCGGCTGGC CCTCATGACC
CTCCAGGGGG AGAAGGGGTA TCCGAGCGCG CTCACCGCCC CCACGTGGGG ATTCTATGAC
GTATCGTTCA AGGGAAGACC GTTCCGCTTC CAGCGCCCCT TTGGCACCTA CGTCATGGAA
AACGTCCTCT TCAAGATCTC CTACCCTGCG GAATTCCATG CCCAGACCGC CGTTGAGGCC
GCAGTGAAGC TCCATCCCCA AGTGCGGGAG CGACTCTCGG ACATCGAAAA GATCGTCATC
ACCACCCACG AATCCGCCAT CCGCATCATC AGCAAGACCG GCAAACTCCA TAACCCGGCG
GACCGGGACC ACTGCCTCCA GTATATGACC GCCATCGGGC TCATTTTCGG GAACCTGACC
GCCGACCATT ACGAAGAGAA GGCTGCGGCC GATCCCCGCA TCGATCCCCT GCGGGAGCGG
ATGGAGGTGG TGGAAGAGCC GCGTTACAGC CGCGAGTATC TTGAGCCGGA CAAACGTTCC
ATCGCCAATG CCGTCCAGGT GTTCTTCCGT GACGGCTCCT GCACCGAGCG CGTGGAGGTG
GAATATCCCC TGGGGCATCG CCGCCGCCGT GCCGAGGGGA TCCCACTCCT GCTGGAGAAA
TTCCGGGCGA ACCTCTCTGC GCGTTTCCCG GAAGAACGGC TCCGGCGGAT AGTCGCCTGC
TGCCAGGATC AGCAGCGGCT GGAGAATACT CCCGTGAATG AATTCATGGA ATTGTTTCTT
ATCTGA
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| Protein sequence | MSTTADVNVR PAPDQVLVDI AEYVTGYRVT SHEARETARY SLIDALGCGM LALTFPECTK
LLGPIVPGIV VPLGARVPGT RYELDPVKAA FDIGCIIRWL DFNDTWLAAE WGHPSDNLGA
ILAVADHLSR RNVAEGNAPV TMGEVLTCMV MAHEIQGCLA LENSFNRVGL DHVLLVKVAS
TAVVMRLLGG TKEQIIDALS QAWVDGQSLR TYRHAPNAGS RKSWAAGDAV SRAVRLALMT
LQGEKGYPSA LTAPTWGFYD VSFKGRPFRF QRPFGTYVME NVLFKISYPA EFHAQTAVEA
AVKLHPQVRE RLSDIEKIVI TTHESAIRII SKTGKLHNPA DRDHCLQYMT AIGLIFGNLT
ADHYEEKAAA DPRIDPLRER MEVVEEPRYS REYLEPDKRS IANAVQVFFR DGSCTERVEV
EYPLGHRRRR AEGIPLLLEK FRANLSARFP EERLRRIVAC CQDQQRLENT PVNEFMELFL
I
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