Gene Gmet_1103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1103 
Symbol 
ID3738596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1226672 
End bp1227157 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content65% 
IMG OID637778381 
ProductGreA/GreB family elongation factor 
Protein accessionYP_384068 
Protein GI78222321 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01461] transcription elongation factor GreB 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0000308289 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0184015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAAAGC AGTCCGACTA CATCACCCCC GAGGGGGCGA AGAAACTCCG CGACGAGCTT 
GCCTGGCTCT GGAAGGAGGA ACGCCCCCGT GTCACCCAGG GCGTTTCCGA CGCCGCCGCC
GAGGGGGACC GTTCGGAAAA CGCCGAGTAT ATCTACGGCA AGAAGCGGCT GCGGGAGATC
GACCGCCGCA TCCGCTTCCT CACCCAGCGC CTCGACCACC TCACCGTGGT CGAGGATCCC
CCTCCCGCCA CTGGCAAGGT CTTTTTCGGC GCCTGGATCA GGCTCGAAAC CGAGGAGGGT
GACGAGGTGA TCTACCGCGT CGTCGGCCCC GACGAGACCG ACGCCTCAAA AGGATTCATC
AGCATCGACT CCCCCATGGG GAAAGCGCTT CTCGGCCGGA ACGAGGGGGA CGAGGTCCCT
GTCCGCCGGC CGGCCGGGGA AGCGGTCTTT ACGGTGCTCG AAGTCGCCTA CCAGCCACTT
TCTTGA
 
Protein sequence
MAKQSDYITP EGAKKLRDEL AWLWKEERPR VTQGVSDAAA EGDRSENAEY IYGKKRLREI 
DRRIRFLTQR LDHLTVVEDP PPATGKVFFG AWIRLETEEG DEVIYRVVGP DETDASKGFI
SIDSPMGKAL LGRNEGDEVP VRRPAGEAVF TVLEVAYQPL S