| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1093 |
|---|
| Symbol | |
|---|
| ID | 3738586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1216641 |
|---|
| End bp | 1217600 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637778371 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_384058 |
|---|
| Protein GI | 78222311 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.00130689 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAAAACCC CGCTGATCGC CTTGGCCTGC ATGGCTTTGG TTCTTGTCTG TTCACCAACG
TCGCGCGCCG ACGACGAAGT GCTCCCCCAG CCGTCTCCTC CCCTCTGCGA AGAGACGCTC
AAGCGCCAGG ATGAGGCCCT TGCTGCCCTC AAGGCGGAAC AGTCCCGGCT GGAGCAGAAG
ATCCGGGATA TGGAGTGCGC CCCGGTCGTT TCCAGCGATG AGCTCCTGGC GAGAAATCTC
CACCATCTCC AGAGCCTGGC GGCCAATACT CGCGCCCAGC GCCAGACCAT GACCGACTTC
AGGACCTTCG TCACCTGGAT GAGCTCAAGC CTTGCGGGAT ACGAGAAGTA CATCCAGGCC
GGCTCGGTGG TGGCCGGAGC CGCCAAGGTT CTCCCCATCC CCTACGCGGG GCAGGCGTCG
ATGCTGACCA AGTTCGTCTC CCAGGGGGTC CTCTCCCTCA ATGCCGCCTC GGGTTCCATT
GCCACGTACC TGAAAATCTC CGACCAGTAC CTGGCCCTGG CCGGCGGCAT CGACCCGAAA
CGCCCCGATC CCGCCCGGGT CTCCGCCGCT GTCCGCTTTG CCGACGGGGA ATTCCTGCGG
TCCATGACCG ATGTCCAGGC CAAGCTGCGG ACCTCCGCCG ACATCTCCGC CTCCACCCTG
TCGTTCCTGA AGACCCTGGA CAGCTATGTG GGAGGGAGTG ACGAATACTG GGCCAGGACC
AAGGCCTTCA TCACCCGCAA CGACGCCTAC AAGAAAGACA AAAGCTATCT GGCCTCGAGC
ATCGAGGGGC TCACGAGCCA GGCCGGAGCG TTCAATAACA GGCTCACCCT CTTCGAGGAA
ACGGCACGCA AGGATCTGCC GATCATCAAG AACCTGGTGG CCTACGACGA ACTGGCGCGG
GAGATCGATG CCCGGGCGCG GCAGAAGCGC GAGGCCATGG CAGCGGCGGT GAAGCCGTAG
|
|---|
| Protein sequence | MKTPLIALAC MALVLVCSPT SRADDEVLPQ PSPPLCEETL KRQDEALAAL KAEQSRLEQK
IRDMECAPVV SSDELLARNL HHLQSLAANT RAQRQTMTDF RTFVTWMSSS LAGYEKYIQA
GSVVAGAAKV LPIPYAGQAS MLTKFVSQGV LSLNAASGSI ATYLKISDQY LALAGGIDPK
RPDPARVSAA VRFADGEFLR SMTDVQAKLR TSADISASTL SFLKTLDSYV GGSDEYWART
KAFITRNDAY KKDKSYLASS IEGLTSQAGA FNNRLTLFEE TARKDLPIIK NLVAYDELAR
EIDARARQKR EAMAAAVKP
|
|---|
| |