Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1088 |
Symbol | |
ID | 3741295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 1212322 |
End bp | 1212753 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637778366 |
Product | cytochrome c, class I |
Protein accession | YP_384053 |
Protein GI | 78222306 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.000582284 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0000137635 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCATGACA GATCCATTGT GACGAAACTG AAGGGTTCGG GACACAGGAG CATCATCGTT GTCGCTATCC TTGCCGGCTG TCTGGCAGCC GCCGGCTGCA AGCAGCAGGA AAAGCCCGTC CAGGCCCCGG CCGAAAAACC GGCCACGGGA GCGGTCCCTC AGACAACCAT GGGAGGCCCC ATGAGTGACC AGCAGACGCA GGCCATGGGG AAAGCCATCT TCAAGAAACA GTGCGCCGGT TGCCACGGCG AAGAGGGTAA AGGGATGAGC GCCCCCTCTC TCCAGAAGGC CGACTTCAAG TACGGTCGCA CTCCCGAGGC GATCAAGGAG ACCATCACCA AGGGACGCCC CGGCGGCATG CCCGCTTTCG GCAACCTCCA GGAAATCGAG GTGGAAACCC TCGTTGCCTA TGTCCTGGGC CTTAAACGGT AA
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Protein sequence | MHDRSIVTKL KGSGHRSIIV VAILAGCLAA AGCKQQEKPV QAPAEKPATG AVPQTTMGGP MSDQQTQAMG KAIFKKQCAG CHGEEGKGMS APSLQKADFK YGRTPEAIKE TITKGRPGGM PAFGNLQEIE VETLVAYVLG LKR
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