Gene Gmet_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1088 
Symbol 
ID3741295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1212322 
End bp1212753 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content61% 
IMG OID637778366 
Productcytochrome c, class I 
Protein accessionYP_384053 
Protein GI78222306 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.000582284 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0000137635 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATGACA GATCCATTGT GACGAAACTG AAGGGTTCGG GACACAGGAG CATCATCGTT 
GTCGCTATCC TTGCCGGCTG TCTGGCAGCC GCCGGCTGCA AGCAGCAGGA AAAGCCCGTC
CAGGCCCCGG CCGAAAAACC GGCCACGGGA GCGGTCCCTC AGACAACCAT GGGAGGCCCC
ATGAGTGACC AGCAGACGCA GGCCATGGGG AAAGCCATCT TCAAGAAACA GTGCGCCGGT
TGCCACGGCG AAGAGGGTAA AGGGATGAGC GCCCCCTCTC TCCAGAAGGC CGACTTCAAG
TACGGTCGCA CTCCCGAGGC GATCAAGGAG ACCATCACCA AGGGACGCCC CGGCGGCATG
CCCGCTTTCG GCAACCTCCA GGAAATCGAG GTGGAAACCC TCGTTGCCTA TGTCCTGGGC
CTTAAACGGT AA
 
Protein sequence
MHDRSIVTKL KGSGHRSIIV VAILAGCLAA AGCKQQEKPV QAPAEKPATG AVPQTTMGGP 
MSDQQTQAMG KAIFKKQCAG CHGEEGKGMS APSLQKADFK YGRTPEAIKE TITKGRPGGM
PAFGNLQEIE VETLVAYVLG LKR